نتایج جستجو برای: ngs

تعداد نتایج: 5131  

Journal: :Clinical cancer research : an official journal of the American Association for Cancer Research 2015
Alexander Drilon Lu Wang Maria E Arcila Sohail Balasubramanian Joel R Greenbowe Jeffrey S Ross Phil Stephens Doron Lipson Vincent A Miller Mark G Kris Marc Ladanyi Naiyer A Rizvi

PURPOSE Broad, hybrid capture-based next-generation sequencing (NGS), as a clinical test, uses less tissue to identify more clinically relevant genomic alterations compared with profiling with multiple non-NGS tests. We set out to determine the frequency of such genomic alterations via this approach in tumors in which previous extensive non-NGS testing had not yielded a targetable driver altera...

2014
Jennifer L. Stoddard Julie E. Niemela Thomas A. Fleisher Sergio D. Rosenzweig

BACKGROUND Primary immunodeficiencies (PIDs) are a diverse group of disorders caused by multiple genetic defects. Obtaining a molecular diagnosis for PID patients using a phenotype-based approach is often complex, expensive, and not always successful. Next-generation sequencing (NGS) methods offer an unbiased genotype-based approach, which can facilitate molecular diagnostics. OBJECTIVE To de...

2016
Yin Zheng Wu-Qing Ouyang Yun-Peng Wei Shahid Faraz Syed Chao-Shuang Hao Bo-Zhen Wang Yan-Hong Shang

Nanoemulsions (NEs) are used as transdermal drug delivery systems for systematic therapeutic purposes. We hypothesized that the skin permeation profile of an NE could be modulated by incorporating it into a hydrogel containing differing proportions of thickening agent. The objectives of this study were as follows: 1) to determine the stability and skin irritability of NE gels (NGs) containing 1...

2016
Steven L. Salzberg Florian P. Breitwieser Anupama Kumar Haiping Hao Peter Burger Fausto J. Rodriguez Michael Lim Alfredo Quiñones-Hinojosa Gary L. Gallia Jeffrey A. Tornheim Michael T. Melia Cynthia L. Sears Carlos A. Pardo

OBJECTIVE To determine the feasibility of next-generation sequencing (NGS) microbiome approaches in the diagnosis of infectious disorders in brain or spinal cord biopsies in patients with suspected CNS infections. METHODS In a prospective pilot study, we applied NGS in combination with a new computational analysis pipeline to detect the presence of pathogenic microbes in brain or spinal cord ...

2017
Yuan Yuan Susan E. Yost John Yim Yate-Ching Yuan Nicola M. Solomon Isa Mambetsariev Sumanta Pal Paul Frankel Ravi Salgia Susan L. Neuhausen Joanne Mortimer

BACKGROUND Next-Generation Sequencing (NGS) has made genomic mutation-driven therapy feasible for metastatic breast cancer (MBC) patients. We frequently submit tumor tissue from MBC patients for targeted NGS of tumor using the Illumina HiSeq 2000 platform (FoundationOne®, Foundation Medicine, MA). Herein, we report the results and clinical impact of this test in MBC patients. PATIENTS AND MET...

2016
Gian Matteo Rigolin Elena Saccenti Cristian Bassi Laura Lupini Francesca Maria Quaglia Maurizio Cavallari Sara Martinelli Luca Formigaro Enrico Lista Maria Antonella Bardi Eleonora Volta Elisa Tammiso Aurora Melandri Antonio Urso Francesco Cavazzini Massimo Negrini Antonio Cuneo

BACKGROUND In chronic lymphocytic leukemia (CLL), next-generation sequencing (NGS) analysis represents a sensitive, reproducible, and resource-efficient technique for routine screening of gene mutations. METHODS We performed an extensive biologic characterization of newly diagnosed CLL, including NGS analysis of 20 genes frequently mutated in CLL and karyotype analysis to assess whether NGS a...

2015
Jim F. Huggett Justin O’Grady Stephen Bustin

Scientific conferences fulfil many roles, but one of the most mportant ones is that they help shape the direction in which a scintific discipline grows by promoting person-to-person exchanges f information, ideas and constructive criticisms between scientists rom different backgrounds. This interaction also helps to idenify areas of controversy and promotes efforts to address and, it is oped, r...

2014
Yaran Yang Bingbing Xie Jiangwei Yan

Next-generation sequencing (NGS) technology, with its high-throughput capacity and low cost, has developed rapidly in recent years and become an important analytical tool for many genomics researchers. New opportunities in the research domain of the forensic studies emerge by harnessing the power of NGS technology, which can be applied to simultaneously analyzing multiple loci of forensic inter...

Journal: :BioTechniques 2014
Steven R Head H Kiyomi Komori Sarah A LaMere Thomas Whisenant Filip Van Nieuwerburgh Daniel R Salomon Phillip Ordoukhanian

High-throughput sequencing, also known as next-generation sequencing (NGS), has revolutionized genomic research. In recent years, NGS technology has steadily improved, with costs dropping and the number and range of sequencing applications increasing exponentially. Here, we examine the critical role of sequencing library quality and consider important challenges when preparing NGS libraries fro...

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