نتایج جستجو برای: microbial profiles

تعداد نتایج: 262005  

2016
Takahiko Shiba Takayasu Watanabe Hirokazu Kachi Tatsuro Koyanagi Noriko Maruyama Kazunori Murase Yasuo Takeuchi Fumito Maruyama Yuichi Izumi Ichiro Nakagawa

Polymicrobial diseases, which can be life threatening, are caused by the presence and interactions of multiple microbes. Peri-implantitis and periodontitis are representative polymicrobial diseases that show similar clinical symptoms. To establish a means of differentiating between them, we compared microbial species and functional genes in situ by performing metatranscriptomic analyses of peri...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2016
Stilianos Louca Alyse K Hawley Sergei Katsev Monica Torres-Beltran Maya P Bhatia Sam Kheirandish Céline C Michiels David Capelle Gaute Lavik Michael Doebeli Sean A Crowe Steven J Hallam

Microorganisms are the most abundant lifeform on Earth, mediating global fluxes of matter and energy. Over the past decade, high-throughput molecular techniques generating multiomic sequence information (DNA, mRNA, and protein) have transformed our perception of this microcosmos, conceptually linking microorganisms at the individual, population, and community levels to a wide range of ecosystem...

2007
Min Fang Peter P. Motavalli Robert J. Kremer Kelly A. Nelson

The effects of Bt corn (Zea mays L.) residue on soil microbial communities and rates of C mineralization were investigated. The Bt corn residue had a higher lignin content (12%) and lignin/N (9.9) ratio compared with its non-Bt near-isoline (10% lignin; lignin/N = 8.6). We examined the relationships among the Bt/non-Bt residue properties, residue component, soil texture, sampling time, and till...

Journal: :Journal of applied microbiology 2002
S M Tiquia

AIMS The objectives of this work were to determine the extracellular enzyme profiles during composting, relate the activities of these enzymes to the changes in microbial population and compare the enzyme profiles between two manures. METHODS AND RESULTS API ZYM assay was used to monitor the activities of 19 extracellular enzymes during poultry and pig manure composting. Results showed an ove...

Journal: :Applied and environmental microbiology 2001
B J MacGregor D P Moser B J Baker E W Alm M Maurer K H Nealson D A Stahl

We have used molecular biological methods to study the distribution of microbial small-subunit rRNAs (SSU rRNAs), in relation to chemical profiles, in offshore Lake Michigan sediments. The sampling site is at a depth of 100 m, with temperatures of 2 to 4 degrees C year-round. RNA extracted from sediment was probed with radiolabeled oligonucleotides targeting bacterial, archaeal, and eukaryotic ...

Journal: :Applied and environmental microbiology 2013
Paul G Dennis Falk Harnisch Yun Kit Yeoh Gene W Tyson Korneel Rabaey

Electrical current can be used to supply reducing power to microbial metabolism. This phenomenon is typically studied in pure cultures with added redox mediators to transfer charge. Here, we investigate the development of a current-fed mixed microbial community fermenting glycerol at the cathode of a bioelectrochemical system in the absence of added mediators and identify correlations between m...

Journal: :Applied and environmental microbiology 1998
Wasserman Felmy

A methodology is presented for calculating of the surface potential, Donnan potential, and ion concentration profiles for semipermeable microbial membranes that is valid for an arbitrary electrolyte composition. This model for surface potential, Donnan potential, and charge density was applied to recently reported experimental data for gram-positive bacteria, including Bacillus brevis, Rhodococ...

2015
Kirsten A. Ziesemer Allison E. Mann Krithivasan Sankaranarayanan Hannes Schroeder Andrew T. Ozga Bernd W. Brandt Egija Zaura Andrea Waters-Rist Menno Hoogland Domingo C. Salazar-García Mark Aldenderfer Camilla Speller Jessica Hendy Darlene A. Weston Sandy J. MacDonald Gavin H. Thomas Matthew J. Collins Cecil M. Lewis Corinne Hofman Christina Warinner

To date, characterization of ancient oral (dental calculus) and gut (coprolite) microbiota has been primarily accomplished through a metataxonomic approach involving targeted amplification of one or more variable regions in the 16S rRNA gene. Specifically, the V3 region (E. coli 341-534) of this gene has been suggested as an excellent candidate for ancient DNA amplification and microbial commun...

2017
Fabien Décaillet Catherine Giannopoulou Norbert Cionca Adnan Almaghlouth Andrea Mombelli

Summary Purpose: We assessed the potential influence of the origin, the smoking status and the age on subgingival microbial profiles of subjects seeking periodontal care in Switzerland today. Material and Methods: Subgingival samples were obtained from 182 subjects originating from 44 countries (56 native Swiss, 64 other European, 43 African, 19 others), seeking periodontal treatment at the Sch...

2017
Long Jin Chang Soo Lee Chi-Yong Ahn Hyung-Gwan Lee Sanghyup Lee Hyeon Ho Shin Dhongil Lim Hee-Mock Oh

The microbial community in eutrophic freshwater sediment was investigated from a 67-cm-deep sediment core collected from the Daechung Reservoir in South Korea, where cyanobacterial blooms have occurred annually for the past 30 years. The majority of core sediments were characterized by dark-grayish, fine-grained mud with abundant gas-escaped and thinly laminated layers. Intervals of summer and ...

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