An Escherichia coli strain, ZUC99(pATX210), which can produce xylitol from L-arabinose at a high yield, has been created by introducing a new bioconversion pathway into the cells. This pathway consists of three enzymes: L-arabinose isomerase (which converts L-arabinose to L-ribulose), D-psicose 3-epimerase (which converts L-ribulose to L-xylulose), and L-xylulose reductase (which converts L-xyl...

A small subset (n = 18) of highly discriminatory tests was derived from the feature frequency of 50 tests used in the study of 167 predominantly clinical Aeromonas strains. Seven of these eighteen tests were used to construct a flexible, dichotomous key, Aerokey II, for identifying clinical aerontonads: esculin hydrolysis, gas from glucose, acid from arabinose, indole production, acid from sucr...

biofilm formation in bacteria is an important survival strategy. biofilm of probiotic bacillus subtilis consist of long chains of cells that are covered by a polymeric matrix of exopolysaccharides. this bacterium is known as one of the most effective biocontrol agents against plant pathogens and has a high ability in biofilm formation. this study was aimed to investigate the effect of some envi...

Inducible switching between phenotypes is a common strategy of bacteria to adapt to fluctuating environments. Here, we analyze the switching kinetics of a paradigmatic inducible system, the arabinose utilization system in E. coli. Using time-lapse fluorescence microscopy of microcolonies in a microfluidic chamber, which permits sudden up- and down-shifts in the inducer arabinose, we characteriz...

We developed 12 models of kinetics to describe the metabolism of organic substrates that are not supporting bacterial growth. These models can be used to describe the biodegradation of organic compounds that are not supporting growth when the responsible populations are growing logistically, logarithmically, or linearly or are not increasing in numbers. Nonlinear regression analysis was used to...

AraC protein, which regulates expression of the l-arabinose operon in Escherichia coli, is a dimer whose DNA binding affinity for pairs of DNA half-sites is controlled by arabinose. Here we have addressed the question of whether the arabinose response of AraC requires the binding of one or two molecules of arabinose. This was accomplished by measuring the DNA dissociation rates of wild-type Ara...

In this study, purification, preliminary characterization and hepatoprotective effects of water-soluble polysaccharides from dandelion root (DRP) were investigated. Two polysaccharides, DRP1 and DRP2, were isolated from DRP. The two polysaccharides were α-type polysaccharides and didn't contain protein. DRP1, with a molecular weight of 5695 Da, was composed of glucose, galactose and arabinose, ...

The aim of this work is to chemically characterize olive tree prunings and use the material in hydrothermal and combustion processes. The influence of the hydrothermal treatment conditions, with and without acid catalyst, of the main fraction of olive tree prunings (stems with a diameter > 1 cm) (temperature 150 to 190oC, time 0 to 20 minutes after reaching the operation temperature, liquid/sol...

Ethanol production from lignocellulosic materials provides an alternative energy production system. Rye and bermudagrass that are used in hog farms for nutrient uptake from swine wastewater have the potential for fuel ethanol production because they have a relative high cellulose and hemicellulose content. Dilute sulfuric acid pretreatment of rye straw and bermudagrass before enzymatic hydrolys...

In its natural environment, the filamentous fungus Aspergillus niger grows on decaying fruits and plant material, thereby enzymatically degrading the lignocellulosic constituents (lignin, cellulose, hemicellulose, and pectin) into a mixture of mono- and oligosaccharides. To investigate the kinetics and stoichiometry of growth of this fungus on lignocellulosic sugars, we carried out batch cultiv...