Heat shock factor (HSF) binds to heat shock elements (HSEs) and the binding can be highly cooperative. Here we report an analysis of binding of Drosophila HSF to both native and synthetic heat shock regulatory regions. We find that cooperative binding of HSF requires close proximity, rather than helical alignment, of HSEs. Two or more trimeric HSEs organized as contiguous 5 bp units show much h...

New triazine-based tricarboxylic acid linkers were prepared as elongated relatives of triazinetribenzoic acid (TATB). Additionally, functional groups (NO2, NH2, OMe, OH) were introduced for potential post-synthetic modification (PSM) of MOFs. Functionalized tris(4-bromoaryl)triazine "cores" (3a,3b) were obtained by unsymmetric trimerization mixing one equivalent of an acid chloride (OMe or NO2 ...

Triangular trinuclear Co(iii), Rh(iii), and Ir(iii) dithiolene complexes, [[M(3)(eta(5)-C(5)Me(5))(3)(S(6)C(6))] (M = Co, Rh, Ir), which have not been obtained by the trimerization of mononuclear complexes, were synthesized via a new synthetic route, that is, the reaction of benzenehexathiol and [(eta(5)-C(5)Me(5))Co(CO)I(2)], [Rh(eta(5)-C(5)Me(5))Cl(2)](2) and [Ir(eta(5)-C(5)Me(5))Cl(2)](2), r...

The lysine and glutamic acid rich protein KERP1 is a unique surface adhesion factor associated with virulence in the human pathogen Entamoeba histolytica. Both the function and structure of this protein remain unknown to this date. Here, we used circular dichroism, analytical ultracentrifugation and bioinformatics modeling to characterize the structure of KERP1. Our findings revealed that it is...

The mechanism of chain selection and trimerization of fibril-associated collagens with interrupted triple helices (FACITs) differs from that of fibrillar collagens that have special C-propeptides. We recently showed that the second carboxyl-terminal non-collagenous domain (NC2) of homotrimeric collagen XIX forms a stable trimer and substantially stabilizes a collagen triple helix attached to ei...

Membrane transporters of the RND superfamily confer multidrug resistance to pathogenic bacteria, and are essential for cholesterol metabolism and embryonic development in humans. We use high-resolution X-ray crystallography and computational methods to delineate the mechanism of the homotrimeric RND-type proton/drug antiporter AcrB, the active component of the major efflux system AcrAB-TolC in ...

Optical second harmonic generation and piezoresponse force microscopy are used to investigate manifestations of ordered states directly related to the presence of an oxide interface. Three examples, each with a very different scope, are reviewed in order to highlight the richness of interface-related phenomena in oxides. (i) The orbital states involved in the emergence of an interfacial conduct...

In recent years, short coiled coils have been used for applications ranging from biomaterial to medical sciences. For many of these applications knowledge of the factors that control the topology of the engineered protein systems is essential. Here, we demonstrate that trimerization of short coiled coils is determined by a distinct structural motif that encompasses specific networks of surface ...