نتایج جستجو برای: chromodomain y cdy1

تعداد نتایج: 494674  

Journal: :Cell 2005
Michael J. Carrozza Bing Li Laurence Florens Tamaki Suganuma Selene K. Swanson Kenneth K. Lee Wei-Jong Shia Scott Anderson John Yates Michael P. Washburn Jerry L. Workman

Yeast Rpd3 histone deacetylase plays an important role at actively transcribed genes. We characterized two distinct Rpd3 complexes, Rpd3L and Rpd3S, by MudPIT analysis. Both complexes shared a three subunit core and Rpd3L contains unique subunits consistent with being a promoter targeted corepressor. Rco1 and Eaf3 were subunits specific to Rpd3S. Mutants of RCO1 and EAF3 exhibited increased ace...

2017
Yuichiro Semba Akihito Harada Kazumitsu Maehara Shinya Oki Chikara Meno Jun Ueda Kazuo Yamagata Atsushi Suzuki Mitsuho Onimaru Jumpei Nogami Seiji Okada Koichi Akashi Yasuyuki Ohkawa

Chromatin reorganization is necessary for pluripotent stem cells, including embryonic stem cells (ESCs), to acquire lineage potential. However, it remains unclear how ESCs maintain their characteristic chromatin state for appropriate gene expression upon differentiation. Here, we demonstrate that chromodomain helicase DNA-binding domain 2 (Chd2) is required to maintain the differentiation poten...

Journal: :Molecular cell 2006
Zhifu Han Lan Guo Huayi Wang Yue Shen Xing Wang Deng Jijie Chai

The WD40 repeat protein WDR5 specifically associates with the K4-methylated histone H3 in human cells. To investigate the structural basis for this specific recognition, we have determined the structure of WDR5 in complex with a dimethylated H3-K4 peptide at 1.9 A resolution. Unlike the chromodomain that recognizes the methylated H3-K4 through a hydrophobic cage, the specificity of WDR5 for met...

Journal: :Cell 2005
Michael-Christopher Keogh Siavash K. Kurdistani Stephanie A. Morris Seong Hoon Ahn Vladimir Podolny Sean R. Collins Maya Schuldiner Kayu Chin Thanuja Punna Natalie J. Thompson Charles Boone Andrew Emili Jonathan S. Weissman Timothy R. Hughes Brian D. Strahl Michael Grunstein Jack F. Greenblatt Stephen Buratowski Nevan J. Krogan

The yeast histone deacetylase Rpd3 can be recruited to promoters to repress transcription initiation. Biochemical, genetic, and gene-expression analyses show that Rpd3 exists in two distinct complexes. The smaller complex, Rpd3C(S), shares Sin3 and Ume1 with Rpd3C(L) but contains the unique subunits Rco1 and Eaf3. Rpd3C(S) mutants exhibit phenotypes remarkably similar to those of Set2, a histon...

Journal: :Cell 2015
Adriana Gonzalez-Sandoval Benjamin D. Towbin Veronique Kalck Daphne S. Cabianca Dimos Gaidatzis Michael H. Hauer Liqing Geng Li Wang Teddy Yang Xinghao Wang Kehao Zhao Susan M. Gasser

Interphase chromatin is organized in distinct nuclear sub-compartments, reflecting its degree of compaction and transcriptional status. In Caenorhabditis elegans embryos, H3K9 methylation is necessary to silence and to anchor repeat-rich heterochromatin at the nuclear periphery. In a screen for perinuclear anchors of heterochromatin, we identified a previously uncharacterized C. elegans chromod...

2017
Weijun Feng Daisuke Kawauchi Huiqin Körkel-Qu Huan Deng Elisabeth Serger Laura Sieber Jenna Ariel Lieberman Silvia Jimeno-González Sander Lambo Bola S Hanna Yassin Harim Malin Jansen Anna Neuerburg Olga Friesen Marc Zuckermann Vijayanad Rajendran Jan Gronych Olivier Ayrault Andrey Korshunov David T W Jones Marcel Kool Paul A Northcott Peter Lichter Felipe Cortés-Ledesma Stefan M Pfister Hai-Kun Liu

Mutations in chromatin modifier genes are frequently associated with neurodevelopmental diseases. We herein demonstrate that the chromodomain helicase DNA-binding protein 7 (Chd7), frequently associated with CHARGE syndrome, is indispensable for normal cerebellar development. Genetic inactivation of Chd7 in cerebellar granule neuron progenitors leads to cerebellar hypoplasia in mice, due to the...

Journal: :The EMBO journal 2003
Richard R Meehan Cheng-Fu Kao Sari Pennings

We have isolated the complete coding sequences for two Xenopus laevis isoforms of heterochromatin protein 1, corresponding to HP1alpha and HP1gamma. The sequence of xHP1alpha shows considerable divergence from its mammalian homologues, whereas xHP1gamma is highly conserved. Functionally, xHP1alpha behaves identically to human HP1alpha. We observe unexpected differences between the two HP1 varia...

2014
Jacqueline M. Ogier Marina R. Carpinelli Benedicta D. Arhatari R. C. Andrew Symons Benjamin T. Kile Rachel A. Burt

CHARGE syndrome is a rare human disorder caused by mutations in the gene encoding chromodomain helicase DNA binding protein 7 (CHD7). Characteristics of CHARGE are varied and include developmental ear and hearing anomalies. Here we report a novel mouse model of CHD7 dysfunction, termed Looper. The Looper strain harbours a nonsense mutation (c.5690C>A, p.S1897X) within the Chd7 gene. Looper mice...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 1998
H Huang E A Wiley C R Lending C D Allis

We report the identification and cloning of a 28-kDa polypeptide (p28) in Tetrahymena macronuclei that shares several features with the well studied heterochromatin-associated protein HP1 from Drosophila. Notably, like HP1, p28 contains both a chromodomain and a chromoshadow domain. p28 also shares features with linker histone H1, and like H1, p28 is multiply phosphorylated, at least in part, b...

Journal: :The EMBO journal 2011
Liangqi Xie Carl Pelz Wensi Wang Amir Bashar Olga Varlamova Sean Shadle Soren Impey

Although regulation of histone methylation is believed to contribute to embryonic stem cell (ESC) self-renewal, the mechanisms remain obscure. We show here that the histone H3 trimethyl lysine 4 (H3K4me3) demethylase, KDM5B, is a downstream Nanog target and critical for ESC self-renewal. Although KDM5B is believed to function as a promoter-bound repressor, we find that it paradoxically function...

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