A simulated annealing method is described for training hidden Markov models and producing multiple sequence alignments from initially unaligned protein or DNA sequences. Simulated annealing in turn uses a dynamic programming algorithm for correctly sampling suboptimal multiple alignments according to their probability and a Boltzmann temperature factor. The quality of simulated annealing alignm...

Quantum annealing is a general strategy for solving difficult optimization problems with the aid of quantum adiabatic evolution. Both analytical and numerical evidence suggests that under idealized, closed system conditions, quantum annealing can outperform classical thermalization-based algorithms such as simulated annealing. Current engineered quantum annealing devices have a decoherence time...

The effect of the initial microstructure and intercritical annealing on mechanical properties and work-hardening response of a high-formability low carbon steel were studied. The work-hardening analysis was based on the modified Crussard–Jaoul method. The ferritic-pearlitic sheets showed low strength and high total elongation with the appearance of the yield point phenomenon. The occurrence of ...

We develop a hybrid type of quantum annealing in which we control temperature and quantum field simultaneously. We study the efficiency of proposed quantum annealing and find a good schedule of changing thermal fluctuation and quantum fluctuation. In this paper, we focus on clustering problems which are important topics in information science and engineering. We obtain the better solution of th...

We report on the demonstration of the effectiveness of nanosecond laser annealing on optical properties of phosphorus ion (P)-implanted ZnO nanorods (NRs). Vertically-alligned ZnO NRs have been synthesized by nanoparticle-assisted pulsed laser deposition (NAPLD) on c-plane sapphire substrates. The pre-laser annealing was performed with the third harmonic (355 nm) of a Qwitched Nd:YAG laser at a...

FePt nanoparticles with thermally stable room-temperature ferromagnetism are investigated. The monodisperse nanoparticles are prepared by chemical synthesis and a salt-matrix annealing technique. Structural and magnetic characterizations confirm the phase transition from the disordered face-centered cubic structure. In this paper, 3 nm FePt nanoparticles are first synthesized by superhydride re...

Zinc Sulfide (ZnS) thin films were deposited on glass substrates at the pressure of 10-6 mbar by thermal resistor evaporation technique. The effects of annealing on the structural, optical properties of ZnS films were studied. Crystalline ZnS films have been analyzed by X-ray diffraction. Only cubic phase with the preferred (111) plane was found in ZnS films. Optical characteristics were studie...

Calcium fluoride nanoparticles with special amount of cerium ion (%1) were synthesized by coprecipitation. Fourier transforms infrared spectroscopy (FTIR), X-ray diffraction (XRD), absorption and photoluminescence (PL) from CaF2Ce nanoparticles has been investigated. FTIR spectra reveal that there are some amounts of OH, NO3 and other organic functional groups on the parti...