Forty sugarcane genotypes (clones), including elite lines, commercial cultivars of Saccharum officinarum and S. barberi clones, were fingerprinted with 30 RAPD markers, using a PCR-based marker assay. The genetic distance for RAPD data was determined according to Nei, and relationships between accessions were graphed in a dendrogram. Genetic distance values ranging from 16.2 to 86.3% were obser...

Forty genotypes (clones) of sugarcane, including elite lines, commercial cultivars of Saccharum officinarum and clones of S. barberi were fingerprinted with 50 SSR markers using a PCR-based marker assay. Nei's genetic distances for SSR data were determined and relationships between accessions were portrayed graphically in the form of a dendrogram. Genetic distance values ranging from 0.60 to 1....

A laboratory in situ composting study was conducted as a possible alternative method for the current practice of open air burning of post-harvest sugarcane residue by sugarcane farmers. In situ composting of the sugarcane residue by the indigenous bacteria and fungi was accelerated using molasses as an initial substrate. A one-time application of molasses boosted the soil microbial population. ...

The sugarcane (Saccharum spp) presents economic importance, mainly for tropical regions, being an important Brazilian commodity. However, this crop is strongly dependent on fertilizers, mainly nitrogen (N). This study assessed the plant growth-promoting bacteria (PGPB) associated with sugarcane that could be used as a potential inoculant to the crop. We evaluated the genetic diversity of PGPB i...

A set of genes related to secondary metabolism was extracted from the sugarcane expressed sequence tag (SUCEST) database and was used to investigate both the gene expression pattern of key enzymes regulating the main biosynthetic secondary metabolism pathways and the major classes of metabolites involved in the response of sugarcane to environmental and developmental cues. The SUCEST database w...

Transgene copy number has a great impact on the expression level and stability of exogenous gene in transgenic plants. Proper selection of endogenous reference genes is necessary for detection of genetic components in genetically modification (GM) crops by quantitative real-time PCR (qPCR) or by qualitative PCR approach, especially in sugarcane with polyploid and aneuploid genomic structure. qP...

Brazil has become one of the top producers and exporters of food, fibre, and bionergy in the world.The expansion of livestock and soybean production in the Amazon basin appears to be independent of the sugarcane expansion in southeastern Brazil whereas the impact of sugarcane expansion over areas of soybean plantation in previous Cerrado biome is still unknown. However, the expansion of sugarca...

The effects of land management including sugarcane, horticultural crops (citrus, avocado and banana), forestry (gum, wattle and pine), kikuyu pasture, native forest and native grassland on the size and composition of the earthworm community on sugarcane estates in northern KwaZulu-Natal was investigated. Earthworm numbers followed the order: burnt sugarcane < trashed sugarcane = grassveld = gum...

We describe the development and application of an expressed sequence tag (EST)-derived restriction fragment length polymorphism (RFLP) marker for sugarcane elite genotypes which can be used for quantitative trait loci (QTL) tagging for sugar content. EST-derived RFLP markers for proteins involved in sucrose metabolism have been used in Southern analysis for mapping and gene tagging in elite sug...

Differential gene expression in sugarcane during sugarcane-Ustilago scitaminea interaction was conducted in a smut-resistant genotype. Using cDNA-AFLP along with silver staining, a total of 136 transcript-derived fragments (TDFs) were found to be differentially expressed in response to challenge by U. scitaminea. Forty TDFs, 34 newly induced plus six with obvious upregulated expression after in...