نتایج جستجو برای: seq ssr

تعداد نتایج: 22807  

Journal: :Genetics and molecular research : GMR 2015
Y S Lin C S Kuan I S Weng C C Tsai

The genetic relationships among 27 pineapple [Ananas comosus (L.) Merr.] cultivars and lines were examined using 16 simple sequence repeat (SSR) markers. The number of alleles per locus of the SSR markers ranged from 2 to 6 (average 3.19), for a total of 51 alleles. Similarity coefficients were calculated on the basis of 51 amplified bands. A dendrogram was created according to the 16 SSR marke...

2017
Aejaz Ahmad Dar Sushma Mudigunda Pramod Kumar Mittal Neelakantan Arumugam

Sesame (Sesamum indicum L.) is an ancient oilseed crop known for its nutty seeds and high-quality edible oil. It is an unexplored crop with a great economic potential. The present study deals with assessment of genetic diversity in the crop. Twenty two RAPD and 18 SSR primers were used for analysis of the 47 different sesame accessions grown in different agroclimatic zones of India. A total of ...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2015
Bernat Corominas-Murtra Rudolf Hanel Stefan Thurner

History-dependent processes are ubiquitous in natural and social systems. Many such stochastic processes, especially those that are associated with complex systems, become more constrained as they unfold, meaning that their sample space, or their set of possible outcomes, reduces as they age. We demonstrate that these sample-space-reducing (SSR) processes necessarily lead to Zipf's law in the r...

Journal: :Environmental science & technology 2006
Tao Cheng Mark O Barnett Eric E Roden Jinling Zhuang

U(VI) adsorption onto goethite-coated sand was studied in batch experiments ata solid-to-solution ratio (SSR) ranging from 33.3 to 333 g/L. Batch kinetic experiments revealed that the presence of 10(-4) M phosphate increased both the initial rate and ultimate extent of U(VI) adsorption compared with phosphate-free systems. Our experimental U(VI) adsorption isotherms were independent of SSR in p...

2016
Jiaowen Cheng Zicheng Zhao Bo Li Cheng Qin Zhiming Wu Diana L. Trejo-Saavedra Xirong Luo Junjie Cui Rafael F. Rivera-Bustamante Shuaicheng Li Kailin Hu

The sequences of the full set of pepper genomes including nuclear, mitochondrial and chloroplast are now available for use. However, the overall of simple sequence repeats (SSR) distribution in these genomes and their practical implications for molecular marker development in Capsicum have not yet been described. Here, an average of 868,047.50, 45.50 and 30.00 SSR loci were identified in the nu...

2017
Junjie Cui Jiaowen Cheng Dingguo Nong Jiazhu Peng Yafei Hu Weiming He Qianjun Zhou Narinder P. S. Dhillon Kailin Hu

Bitter gourd (Momordica charantia) is widely cultivated as a vegetable and medicinal herb in many Asian and African countries. After the sequencing of the cucumber (Cucumis sativus), watermelon (Citrullus lanatus), and melon (Cucumis melo) genomes, bitter gourd became the fourth cucurbit species whose whole genome was sequenced. However, a comprehensive analysis of simple sequence repeats (SSRs...

2012
Fumiya Taniguchi Hiroyuki Fukuoka Junichi Tanaka

Tea is one of the most popular beverages in the world and the tea plant, Camellia sinensis (L.) O. Kuntze, is an important crop in many countries. To increase the amount of genomic information available for C. sinensis, we constructed seven cDNA libraries from various organs and used these to generate expressed sequence tags (ESTs). A total of 17,458 ESTs were generated and assembled into 5,262...

2012
Moriyuki Shoda Naoya Urasaki Sumisu Sakiyama Shingo Terakami Fumiko Hosaka Narumi Shigeta Chikako Nishitani Toshiya Yamamoto

We developed 18 polymorphic simple sequence repeat (SSR) markers in pineapple (Ananas comosus) by using genomic libraries enriched for GA and CA motifs. The markers were used to genotype 31 pineapple accessions, including seven cultivars and 11 breeding lines from Okinawa Prefecture, 12 foreign accessions and one from a related species. These SSR loci were highly polymorphic: the 31 accessions ...

Journal: :Genetics and molecular research : GMR 2015
M Ipek A Ipek M Seker M K Gul

The purpose of this research was to characterize an olive core collection using some agronomic characters and simple sequence repeat (SSR) markers and to determine SSR markers associated with the content of fatty acids in olive oil. SSR marker analysis demonstrated the presence of a high amount of genetic variation between the olive cultivars analyzed. A UPGMA dendrogram demonstrated that olive...

2015
Hyun Jung Kim Hea Eun Yang Dae Hyun Kim Yoon Ghil Park

OBJECTIVE To investigate the predictive value of the sympathetic skin response (SSR) in diagnosing complex regional pain syndrome (CRPS) by comparing three diagnostic modalities-SSR, three-phasic bone scans (TPBS), and thermography. METHODS Thirteen patients with severe limb pain were recruited. Among them, 6 were diagnosed with CRPS according to the proposed revised CRPS clinical diagnostic ...

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