نتایج جستجو برای: microsatellite markers

تعداد نتایج: 232777  

Journal: :PeerJ 2016
Christine Ewers-Saucedo John D Zardus John P Wares

Microsatellite markers remain an important tool for ecological and evolutionary research, but are unavailable for many non-model organisms. One such organism with rare ecological and evolutionary features is the epizoic barnacle Chelonibia testudinaria (Linnaeus, 1758). Chelonibia testudinaria appears to be a host generalist, and has an unusual sexual system, androdioecy. Genetic studies on hos...

2016
Yan Lv Tao Yu Sihai Lu Cheng Tian Junqing Li Fang K. Du

PREMISE OF THE STUDY There is a need for microsatellite primers to analyze genetic parameters of Fargesia denudata (Poaceae), the staple-food bamboo of the giant panda (Ailuropoda melanoleuca). METHODS AND RESULTS Using next-generation sequencing technology, we obtained a 75-Mb assembled sequence of F. denudata and identified 182 microsatellites. Primer pairs for 70 candidate microsatellite m...

2017
Hayley R. Tumas Brian M. Shamblin Mark S. Woodrey Campbell J. Nairn

PREMISE OF THE STUDY Juncus roemerianus (Juncaceae) is a foundational species and ecosystem engineer of salt marshes in the Gulf of Mexico. These ecosystems provide coastal flood attenuation, nurseries for important species, and other ecosystem services, but are experiencing significant decline. Nuclear microsatellite markers were developed for J. roemerianus to study genetic diversity and popu...

2014
Na Wei Christopher W. Dick

UNLABELLED PREMISE OF THE STUDY Novel microsatellite markers were characterized in the wind-dispersed and dioecious neotropical tree Triplaris cumingiana (Polygonaceae) for use in understanding the ecological processes and genetic impacts of pollen- and seed-mediated gene flow in tropical forests. • METHODS AND RESULTS Sixty-two microsatellite primer pairs were screened, from which 12 mark...

2017
Yuji Igarashi Hiroki Aihara Yoshihiro Handa Hiroshi Katsumata Masanori Fujii Koichiro Nakano Toshihide Hirao

PREMISE OF THE STUDY Microsatellite markers were developed and characterized for the critically endangered birch Betula chichibuensis (Betulaceae) to investigate the genetic structure of this species for conservation purposes. METHODS AND RESULTS Sixteen microsatellite markers with di-, tri-, and tetranucleotide repeat motifs were developed and optimized using MiSeq paired-end sequencing. Of ...

Journal: :Animal genetics 2005
M Miwa M Inoue-Murayama B B Kayang A Vignal F Minvielle J L Monvoisin H Takahashi S Ito

The objective of this work was to map classical markers (plumage colours and blood proteins) on the microsatellite linkage map of the Japanese quail (Coturnix japonica). The segregation data on two plumage colours and three blood proteins were obtained from 25 three-generation families (193 F2 birds). Linkage analysis was carried out for these five classical markers and 80 microsatellite marker...

2016
Bo Zhao Yun-Qian Du Jing-Jian Li Wen-Xiu Tang Shu-Hua Zhong

PREMISE OF THE STUDY Begonia fimbristipula (Begoniaceae) is a medicinal herb distributed in the Chinese provinces of Fujian, Guangdong, Guangxi, Hainan, Hunan, Jiangxi, and Zhejiang, and it is on the verge of extinction due to habitat destruction and deterioration of its ecosystem. Here we developed a set of highly polymorphic microsatellite markers for population genetic and conservation studi...

Journal: :Genetics and molecular research : GMR 2014
L Zhang G Li G C He L L Zhu R Qin S L Jing

The whitebacked planthopper Sogatella furcifera (Horváth) (Hemiptera: Delphacidae) is one of the most harmful pests of rice. In this study, 18 polymorphic microsatellite markers were developed from S. furcifera genomic libraries using the fast isolation by amplified fragment length polymorphism of sequences containing repeat protocols. Microsatellite polymorphism was investigated using 32 indiv...

2013
Diana O. Ribeiro Christina C. Vinson Dulcivania S. S. Nascimento Ulf Mehlig Moirah P. M. Menezes Iracilda Sampaio Marivana B. Silva

UNLABELLED PREMISE OF THE STUDY Three species of the mangrove tree genus Rhizophora are found in the New World and along the west coast of Africa. Of these, R. mangle is the most abundant and has a complex interbreeding relationship with the sympatric R. racemosa and R. harrisonii. The development of additional microsatellite markers would permit paternity analyses and investigation of the h...

2008
José Suazo José Luis Santos Lilian Jara Rafael Blanco

Nonsyndromic cleft lip/palate (NSCLP) is a congenital malformation with features of a complex genetic trait. Several studies have reported positive association and linkage between NSCLP and microsatellite markers in the 4q28-4q33 region particularly with the D4S192 (4q31) marker. We hypothesized that the candidate genes SMAD1 and HHIP (4q31) could be involved in the etiology of NSCLP based on p...

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