نتایج جستجو برای: est ssr

تعداد نتایج: 32398  

Journal: :Mathematical Biology and Bioinformatics 2022

EST-derived simple sequence repeat markers (EST-SSRs) are important tools for studies on genetic diversity, phylogeny, evolution, comparative genomics, QTL analysis, and gene-based associations. We have searched the literature known EST-SSRs used Scots pine (Pinus sylvestris L.) – one of world’s major forest species. Then, 91 102 suggested were manually aligned against reference genome Pinus ta...

2011
Gaurav Sablok Chun Luo Wan Sin Lee Farzana Rahman Tatiana V. Tatarinova Jennifer Ann Harikrishna Zhengrong Luo

We present here a systematic analysis of the Diospyros kaki expressed sequence tags (ESTs) generated from development stage-specific libraries. A total of 2,529 putative tentative unigenes were identified in the MF library whereas the OYF library displayed 3,775 tentative unigenes. Among the two cDNA libraries, 325 EST-Simple sequence repeats (SSRs) in 296 putative unigenes were detected in the...

2017
Haijun Liu Zhihua Yan Hualing Xu Chunmei Li Qiang Fan Wenbo Liao Boyong Liao

Premise of the study Brainea insignis (Aspleniaceae) is an endangered tree fern in China whose wild populations have been seriously damaged due to overexploitation. Expressed sequence tag-simple sequence repeat (EST-SSR) primers were developed to investigate its genetic diversity and provide resources for future conservation studies. Methods and Results We obtained 72,897 unigenes of B. insig...

Journal: :Genome 2008
B Shaun Bushman Steve R Larson Ivan W Mott Paul F Cliften Richard R-C Wang N Jerry Chatterton Alvaro G Hernandez Shahjahan Ali Ryan W Kim Jyothi Thimmapuram George Gong Lei Liu Mark A Mikel

Triticeae contains hundreds of species of both annual and perennial types. Although substantial genomic tools are available for annual Triticeae cereals such as wheat and barley, the perennial Triticeae lack sufficient genomic resources for genetic mapping or diversity research. To increase the amount of sequence information available in the perennial Triticeae, three expressed sequence tag (ES...

Journal: :Genetics and molecular research : GMR 2015
C A Nogueira N B Stafuzza T P Ribeiro A D L Prado I P P Menezes N Peixoto P J Gonçalves L M Almeida

Hancornia speciosa, popularly known as mangabeira, is a fruit tree native to the Brazilian Cerrado that shows great economic potential, due to its multiple uses. Intraspecific classification of this species is difficult because it shows high morphological diversity. An early study of the species reported that there are six botanic varieties that differ morphologically mainly in the shapes of th...

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