4 CAGEr workflow 6 4.1 Specifying input files . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 4.2 Creating CAGEset object . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 4.3 Reading in the data . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8 4.4 Correlation between samples . . . . . . . . . . . . . . . . . . . . . . . . . 9 4.5 Normalization . . . . . . . . . ....

Thirty-two cultivars of 10 commonly-grown bedding plants, representing eight families, were evaluated for their response to infection by the root-knot nematode, Meloidogyne incognita race 3, under greenhouse conditions. Four ageratum cultivars, two marigold, and two salvia cultivars were rated resistant after exposure for 8 weeks. Four begonia, four celosia, one dianthus, one verbena, one vinca...

This review examines potential impacts of transgenic cultivars on insect population dynamics and evolution. Experience with classically bred, insecticidal cultivars has demonstrated that a solid understanding of both the target insect's ecology and the cultivar's performance under varied field conditions will be essential for predicting area-wide effects of transgenic cultivars on pest and natu...

The chemical composition and radical-scavenging activity of wood samples from 10 main Spanish olive cultivars were studied. The wood samples were collected during the pruning works from trees growing under the same agronomical and environmental conditions. The 10 ethyl acetate extracts were submitted to HPLC-DAD/ESI-MS analysis to determine the phenolic constituents. Seventeen compounds were id...

Aroma is important in assessing the quality of fresh fruit and their processed products, and could provide good indicators for the development of local cultivars in the mango industry. In this study, the volatile diversity of 25 mango cultivars from China, America, Thailand, India, Cuba, Indonesia, and the Philippines was investigated. The volatile compositions, their relative contents, and the...

Throughout the Southern Great Plains, wheat is managed frequently as a dual-purpose crop, but this production paradigm is not necessarily applicable throughout other regions of the United States, and a wider array of management options can be considered for forage-only uses of cereal grains. Our objectives were to assess the fall-growth potential of wheat (Triticum aestivum L.), triticale (X Tr...

The volatile composition of white Agudelo, Blancolexitimo, Godello and red Serradelo cultivars (NW Spain) harvested at two different stages of ripening have been evaluated. C(6)-compounds, alcohols, volatile fatty acids, monoterpenes, C(13)-norisoprenoids, volatile phenols and carbonyl compounds were identified and quantified in free and glycosidically bound forms by gas chromatography-mass spe...

Phoenix dactylifera L. (date palm), being economically very important, is widely cultivated in the Middle East and North Africa, having about 400 different cultivars. Assessment of date cultivars under trading and farming is a widely accepted problem owing to lack of a unique molecular signature for specific date cultivars. In the present study, eight different cultivars of dates viz., Khodry, ...

The sensitivity of yield and quality parameters to carbon dioxide concentration [CO2] was determined for individual lines of hard-red spring wheat released in 1903, 1921, 1965 and 1996. All cultivars were evaluated with respect to growth and vegetative characteristics, grain yield and nutritional quality in response to [CO2] increases that corresponded roughly to the CO2 concentrations at the b...