نتایج جستجو برای: clinical exome sequencing

تعداد نتایج: 1271061  

Hasan Otukesh, Mohammad Keramatipour, Parisa Moeinian, Rasoul Alizadeh, Rozita Hosseini, Saeed Talebi, Sanaz Jamshidi,

Background: Nephronophthisis (NPHP) is a progressive tubulointestinal kidney condition that demonstrates an AR inheritance pattern. Up to now, more than 20 various genes have been detected for NPHP, with NPHP1 as the first one detected. X-prolyl aminopeptidase 3 (XPNPEP3) mutation is related to NPHP-like 1 nephropathy and late onset NPHP. Methods: The proband (index patient) had polyuria, polyd...

2012
Roopika Menon Mario Deng Diana Boehm Martin Braun Falko Fend Detlef Boehm Saskia Biskup Sven Perner

Next generation sequencing (NGS) technologies have revolutionized cancer research allowing the comprehensive study of cancer using high throughput deep sequencing methodologies. These methods detect genomic alterations, nucleotide substitutions, insertions, deletions and copy number alterations. SOLiD (Sequencing by Oligonucleotide Ligation and Detection, Life Technologies) is a promising techn...

Journal: :Circulation. Cardiovascular genetics 2015
Nathan O Stitziel Gina M Peloso Marianne Abifadel Angelo B Cefalu Sigrid Fouchier M Mahdi Motazacker Hayato Tada Daniel B Larach Zuhier Awan Jorge F Haller Clive R Pullinger Mathilde Varret Jean-Pierre Rabès Davide Noto Patrizia Tarugi Masa-Aki Kawashiri Atsushi Nohara Masakazu Yamagishi Marjorie Risman Rahul Deo Isabelle Ruel Jay Shendure Deborah A Nickerson James G Wilson Stephen S Rich Namrata Gupta Deborah N Farlow Benjamin M Neale Mark J Daly John P Kane Mason W Freeman Jacques Genest Daniel J Rader Hiroshi Mabuchi John J P Kastelein G Kees Hovingh Maurizio R Averna Stacey Gabriel Catherine Boileau Sekar Kathiresan

BACKGROUND Exome sequencing is a promising tool for gene mapping in Mendelian disorders. We used this technique in an attempt to identify novel genes underlying monogenic dyslipidemias. METHODS AND RESULTS We performed exome sequencing on 213 selected family members from 41 kindreds with suspected Mendelian inheritance of extreme levels of low-density lipoprotein cholesterol (after candidate ...

2017
Lídia Feliubadaló Raúl Tonda Mireia Gausachs Jean-Rémi Trotta Elisabeth Castellanos Adriana López-Doriga Àlex Teulé Eva Tornero Jesús del Valle Bernat Gel Marta Gut Marta Pineda Sara González Mireia Menéndez Matilde Navarro Gabriel Capellá Ivo Gut Eduard Serra Joan Brunet Sergi Beltran Conxi Lázaro

Next generation sequencing panels have been developed for hereditary cancer, although there is some debate about their cost-effectiveness compared to exome sequencing. The performance of two panels is compared to exome sequencing. Twenty-four patients were selected: ten with identified mutations (control set) and fourteen suspicious of hereditary cancer but with no mutation (discovery set). Tru...

2015
Hui Guo Jisheng Li Fei Gao Jiangxia Li Xinyi Wu Qiji Liu

BACKGROUND Genomic mutations in about 200 genes are associated with hereditary retinal diseases. In this study, we screened for the disease-causing gene mutation in a family with X-linked retinal degenerative disease. METHODS Pedigree data were collected and genomic DNA was isolated from peripheral blood of family members, who also underwent comprehensive ophthalmic examination including visu...

2012
Zhong Zhuang Alexander Gusev Judy Cho Itsik Pe'er

The detection of genetic segments of Identical by Descent (IBD) in Genome-Wide Association Studies has proven successful in pinpointing genetic relatedness between reportedly unrelated individuals and leveraging such regions to shortlist candidate genes. These techniques depend on high-density genotyping arrays and their effectiveness in diverse sequence data is largely unknown. Due to decreasi...

2015
Kristin E. Clift Colin M.E. Halverson Alexander S. Fiksdal Ashok Kumbamu Richard R. Sharp Jennifer B. McCormick

This article characterizes the opinions of patients and family members of patients undergoing clinical genomic-based testing regarding the return of incidental findings from these tests. Over sixteen months, we conducted 55 in-depth interviews with individuals to explore their preferences regarding which types of results they would like returned to them. Responses indicate a diversity of attitu...

2012
Anna C Need Vandana Shashi Yuki Hitomi Kelly Schoch Kevin V Shianna Marie T McDonald Miriam H Meisler David B Goldstein

BACKGROUND There is considerable interest in the use of next-generation sequencing to help diagnose unidentified genetic conditions, but it is difficult to predict the success rate in a clinical setting that includes patients with a broad range of phenotypic presentations. METHODS The authors present a pilot programme of whole-exome sequencing on 12 patients with unexplained and apparent gene...

Journal: :Clinical genetics 2016
V Shashi A McConkie-Rosell K Schoch V Kasturi C Rehder Y H Jiang D B Goldstein M T McDonald

Despite the exciting advent of whole-exome sequencing (WES) in medical genetics practices, the optimal interpretation of results requires further actions such as reconsidering clinical information and obtaining further laboratory testing. There are no published data to guide clinicians in this process. In a retrospective study on 93 patients who underwent clinical WES, we set out to assess and ...

2014
Thomas Besnard Gema García-García David Baux Christel Vaché Valérie Faugère Lise Larrieu Susana Léonard Jose M Millan Sue Malcolm Mireille Claustres Anne-Françoise Roux

We show that massively parallel targeted sequencing of 19 genes provides a new and reliable strategy for molecular diagnosis of Usher syndrome (USH) and nonsyndromic deafness, particularly appropriate for these disorders characterized by a high clinical and genetic heterogeneity and a complex structure of several of the genes involved. A series of 71 patients including Usher patients previously...

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