We recently assessed the metabolism of Synechocystis sp PCC6803 through a constraints-based reconstruction and analysis approach and identified its main metabolic properties. These include reduced metabolic robustness, in contrast to a high photosynthetic robustness driving the optimal autotrophic metabolism. Here, we address how these metabolic features affect biotechnological capabilities of ...

Transfer of heterotrophically grown cells of the unicellular green alga Chlorogonium elongatum to autotrophic growth conditions causes a 10-15 fold increase in the amount of the chloroplastic enzyme ribulose-1,5-bisphosphate carboxylase. This increase was found to be due to de novo synthesis. The relative proportions of large and small subunits of the enzyme do not change. Their ratio is close ...

There are two alternatives concerning the origin of life: the origin may be heterotrophic or autotrophic. The central problem within the theory of an autotrophic origin is the first process of carbon fixation. I here propose the hypothesis that this process is an autocatalytic cycle that can be retrodictively constructed from the extant reductive citric acid cycle by replacing thioesters by thi...

Metabolic flux analysis (MFA) is a powerful approach for quantifying plant central carbon metabolism based upon a combination of extracellular flux measurements and intracellular isotope labeling measurements. In this chapter, we present the method of isotopically nonstationary (13)C MFA (INST-MFA), which is applicable to autotrophic systems that are at metabolic steady state but are sampled du...

Identification of anaerobic ammonium oxidizing (anammox) bacteria by molecular tools aimed at the evaluation of bacterial diversity in autotrophic nitrogen removal systems is limited by the difficulty to design universal primers for the Bacteria domain able to amplify the anammox 16S rRNA genes. A metagenomic analysis (pyrosequencing) of total bacterial diversity including anammox population in...

Biological indices based on the biomass (dry weight, ash content, and chlorophyll-a) of the periphyton in a natural (submersed leaves of Typha domingensis Pers) and in an artificial (plastic hoses) substrate were compared, in experiments performed in summer and winter, in two sampling stations of Imboassica Lagoon, Macaé, Rio de Janeiro. The periphytic community exhibited low biomass at the beg...

The effects of various parameters on bromate reduction were tested using lab-scale batch reactors with sulfur based autotrophic and methanol based heterotrophic denitrification processes. The initial bromate (BrO3-) concentration of 100 and 500 μg/L was completely reduced and bromide (Br-) was produced stoichiometrically from bromate in all batch reactors. In all experiments, nitrate was comple...