نتایج جستجو برای: vntr genotyping

تعداد نتایج: 25021  

Journal: :Journal of clinical microbiology 2013
Elena Iakhiaeva Steven McNulty Barbara A Brown Elliott Joseph O Falkinham Myra D Williams Ravikiran Vasireddy Rebecca W Wilson Christine Turenne Richard J Wallace

Strain comparison is important to population genetics and to evaluate relapses in patients with Mycobacterium avium complex (MAC) lung disease, but the "gold standard" of pulsed-field gel electrophoresis (PFGE) is time-consuming and complex. We used variable-number tandem repeats (VNTR) for fingerprinting of respiratory isolates of M. intracellulare from patients with underlying bronchiectasis,...

2017
Rondroarivelo Rasoahanitralisoa Niaina Rakotosamimanana David Stucki Christophe Sola Sebastien Gagneux Voahangy Rasolofo Razanamparany

BACKGROUND Combining different molecular typing methods for Mycobacterium tuberculosis complex (MTBC) can be a powerful tool for molecular epidemiology-based investigation of TB. However, the current standard method that provides high discriminatory power for such a combination, mycobacterial interspersed repetitive units-variable numbers of tandem repeats typing (MIRU-VNTR), is laborious, time...

2015
Morteza Bagheri Isa Abdi Rad Nima Hosseini Jazani Rasoul Zarrin Ahad Ghazavi

BACKGROUND The variable numbers of tandem-repeat (VNTR) alleles at the phenylalanine hydroxylase (PAH) gene have been used in carrier detection and prenatal diagnosis in phenylketonuria families. This study was carried out to analyze VNTR alleles at the PAH gene in Iranian Azeri Turkish population. METHODS In this study, 200 alleles from general population were studied by PCR. RESULTS The f...

Journal: :Molecular microbiology 2003
Philip Supply Robin M Warren Anne-Laure Bañuls Sarah Lesjean Gian D Van Der Spuy Lee-Anne Lewis Michel Tibayrenc Paul D Van Helden Camille Locht

Deciphering the structure of pathogen populations is instrumental for the understanding of the epidemiology and history of infectious diseases and for their control. Although Mycobacterium tuberculosis is the most widespread infectious agent in humans, its actual population structure has remained hypothetical until now because: (i) its structural genes are poorly polymorphic; (ii) adequate samp...

2013
Dinesh K. Tripathi Kanchan Srivastava Surya Kant Kishore K. Srivastava

Multidrug-resistant tuberculosis (MDR-TB) is a major public health problem because treatment is complicated, cure rates are well below those for drug susceptible tuberculosis (TB), and patients may remain infectious for months or years despite receiving the best available therapy. To gain a better understanding of MDR-TB, we characterized isolates recovered from 69 patients with MDR-TB, by use ...

2010
Gunjan Joshi Sunil Pradhan Balraj Mittal

We aimed to find out if the serotonin receptor (HT102T>C) and serotonin transporter (STin 2) polymorphisms play any role in genetic susceptibility of migraine. For the study, 217 migraine patients and 217 healthy controls (HC) were recruited and genotyping was carried out using the Polymerase Chain Reaction and Restriction Fragment Length polymorphism (PCR-RFLP) method. All results were Bonferr...

Journal: :Memorias do Instituto Oswaldo Cruz 2012
Karina Caimi Vanina Varni Yamil Melendez Ariel Koval Bibiana Brihuega Paula Ruybal

Leptospirosis is an emerging infectious disease that has been identified as both a human and animal health problem worldwide. Regular outbreaks associated with specific risk factors have been reported in Argentina. However, there are no available data concerning the genetic population level for this pathogen. Therefore, the aim of this work was to describe the genetic diversity of Leptospira in...

Journal: :Anatomía Digital 2021

Molecular genotyping of Mycobacterium tuberculosis allows for the identification circulating lineages and sublineages in population their relationship with migratory movements. The purpose this review is to describe phylogeography reported South American countries that was analyzed using tools, analyze Tuberculosis hotspots region determine impact COVID-19 pandemic on control program. Latin Med...

2009
Denise M Nishita Lisa M Jack Mary McElroy Jennifer B McClure Julie Richards Gary E Swan Andrew W Bergen

BACKGROUND Clinical trial and epidemiological studies need high quality biospecimens from a representative sample of participants to investigate genetic influences on treatment response and disease. Obtaining blood biospecimens presents logistical and financial challenges. As a result, saliva biospecimen collection is becoming more frequent because of the ease of collection and lower cost. This...

Journal: :Physiological genomics 2006
Rainer Fürbass Andreas Winter Ruedi Fries Christa Kühn

A quantitative trait locus (QTL) affecting milk fat percentage has been mapped to the centromeric end of the bovine chromosome 14 (BTA14). This genomic area includes the DGAT1 gene, which encodes acyl-CoA:diacylglycerol acyltransferase 1, the key enzyme of triglyceride biosynthesis. Genetic and biochemical studies led to the identification of the nonconservative DGAT1-K232A polymorphism as a ca...

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