Advances in sequencing technology have made abundant RNA sequence information available, but the challenge of how to interpret these data remains. The RNA sequence contains many layers of information. RNA sequences code for proteins and small RNAs, such as microRNAs or transacting small interfering RNAs (siRNAs). RNA encodes information about both structure and function. Viral RNA structures, s...

The cell cycle and biological processes rely on RNA RNA-binding protein (RBP) interactions. It is crucial to identify the binding sites RNA. Various deep-learning methods have been used for site prediction. However, they cannot extract hierarchical features of secondary structure. Therefore, this paper proposes HPNet, which can automatically -binding preferences. HPNet performs feature learning...

the eukaryotic complexity involves the expression and regulation of genes via rna-dna, rna-rna, dna-protein and rna-protein interactions. recently, the role of rna molecules in the regulation of genes in higher organisms has become more evident, especially with the discovery that about 97% of the transcriptional output in higher organisms are represented as noncoding rnas: rrna, snornas, trna, ...