Rattus tiomanicus is a murid rodent of considerable agricultural and public health importance in Southeast Asia. The whole mitochondrial genome R. was sequenced by the Ion Torrent PGM platform. It had total length 16,309 bp, consisting 13 protein-coding genes, two rRNA 22 tRNA genes non-coding regions (L-strand replication origin control region). Only TAA incomplete T-stop codons were represent...

The single most difficult problem in phylogenetic analysis is deciding whether a shared taxonomic character is due to common ancestry or one that appeared independently due to convergence, parallelism, or reversion to an ancestral state. Mammalian L1 retrotransposons undergo periodic amplifications in which multiple copies of the elements are interspersed in the genome. Because these elements a...

Notocotylus loeiensis n. sp. (Trematoda: Notocotylidae) is described from the cecum of the lesser rice field rat (Rattus losea), from Loei Province in Thailand with a prevalence of 9.1% (eight of 88 rats infected). The new species differs from previously described Notocotylus species mainly by the extreme prebifurcal position of the genital pore and the number of ventral papillae. This is the f...

Recent work has suggested that there are many more selectively constrained, functional noncoding than coding sites in mammalian genomes. However, little is known about how selective constraint varies amongst different classes of noncoding DNA. We estimated the magnitude of selective constraint on a large dataset of mouse-rat gene orthologs and their surrounding noncoding DNA. Our analysis indic...

Although sequences containing regulatory elements located close to protein-coding genes are often only weakly conserved during evolution, comparisons of rodent genomes have implied that these sequences are subject to some selective constraints. Evolutionary conservation is particularly apparent upstream of coding sequences and in first introns, regions that are enriched for regulatory elements....

Cross-transmission experiments were done using sporulated oocysts of Eimeria arizonensis from Peromyscus truei and Peromyscus maniculatus, and oocysts of 2 putative species that resemble E. arizonensis, i.e., Eimeria albigulae from Neotoma albigula, and Eimeria onychomysis from Onychomys leucogaster. Oocysts of each species were inoculated into representatives of P. maniculatus and the latter 2...

Medwayella independencia, a new species of flea, is described from the tupaiid host Urogale everetti (Thomas) from Mindanao Island, Philippines. Several other species of fleas are also recorded from the Philippines including a single male of Lentistivalius philippinensis Hastriter and Bush, 2013 (previously known only from two males), the bat fleas Thaumapsylla breviceps orientalis Smit and Tha...

The first contact a virus makes with cells is an important determinant of its tropism. Murid Herpesvirus-4 (MuHV-4) is highly dependent on glycosaminoglycans (GAGs) for cell binding. Its first contact is therefore likely to involve a GAG-binding virion glycoprotein. We have previously identified two such proteins, gp70 and gp150. Gp70 binds strongly to GAGs. However, deleting it makes little di...

Gallegostrongylus australis n. sp. (Nematoda: Angiostrongylidae) is described from subpleural nodules in the lungs of Rattus fuscipes, R. lutreolus and Mus domesticus in Australia. It is distinguished from G. andersoni occurring in gerbillids in West Africa by the shorter lengths of spicules and gubernaculum, and from G. ibicensis occurring in microtids and murids in Spain by the greater length...

Leptospirosis is an acute, febrile disease occurring in humans and animals worldwide. Leptospira spp. are usually transmitted through direct or indirect contact with the urine of infected reservoir animals. Among wildlife species, rodents act as the most important reservoir for both human and animal infection. To gain a better understanding of the occurrence and distribution of pathogenic lepto...