The vibrational spectra of ammonia and the hydronium ion, including both their symmetric and asymmetric isotopomers, are calculated variationally using potential energy surfaces obtained with the latest methods of electronic structure calculation. The centrally bound ammonia-type molecules are interesting systems to study, due to the combination of the large-amplitude inversion motion and five ...

The role of water molecules in assisting proton transfer (PT) is investigated for the proton-pumping protein ferredoxin I (FdI) from Azotobacter vinelandii. It was shown previously that individual water molecules can stabilize between Asp(15) and the buried [3Fe-4S](0) cluster and thus can potentially act as a proton relay in transferring H(+) from the protein to the μ(2) sulfur atom. Here, we ...

Interfacial water structures of aqueous dimethyl sulfoxide (DMSO) and methanesulfonic acid (MSA) were studied by Raman, infrared, and conventional and phase-sensitive vibrational sum frequency generation (VSFG) spectroscopies. Through isotopic dilution, we probed bulk water hydrogen bonding strength using the vibrational frequency of dilute OD in H(2)O. As indicated by the frequency shift of th...

Conditional and time-dependent radial distribution functions reveal the details of the water structure surrounding the hydronium during the proton mobility process. Using this methodology for classical multistate empirical valence bond (MS-EVB) and ab initio molecular dynamics trajectories, as well as quantal MS-EVB trajectories, we supply statistical proof that proton hops in liquid water occu...

The surface charge of water, which is important in a wide range of chemical, biological, material, and environmental contexts, has been a subject of lengthy and heated debate. Recently, it has been shown that the highly efficient LEWIS force field, in which semiclassical, independently mobile valence electron pairs capture the amphiproticity, polarizability and H-bonding of water, provides an e...

A new computational scheme is presented for calculation of sum frequency generation (SFG) spectra, based on the exciton model for OH bonds. The scheme is applied to unified analysis of the SFG spectra in the OH-stretch region of the surfaces of ice, liquid water, and acid solution. A significant role of intermolecularly coupled collective modes is pointed out. SFG intensity amplification observ...