Recent large-scale studies of evolutionary changes in gene expression among mammalian species have led to the proposal that gene expression divergence may be neutral with respect to organismic fitness. Here, we employ a comparative analysis of mammalian gene sequence divergence and gene expression divergence to test the hypothesis that the evolution of gene expression is predominantly neutral. ...

Gene duplication has been proposed to serve as the engine of evolutionary innovation. It is well recognized that eukaryotic genomes contain a large number of duplicated genes that evolve new functions or expression patterns. However, in mollusks, the evolutionary mechanisms underlying the divergence and the functional maintenance of duplicate genes remain little understood. In the present study...

Song divergence among populations of passerine birds is recognized as a potentially important premating isolation mechanism and may represent the first step in speciation. Because song divergence may be influenced by an array of acoustic, ecological, and genetic factors, the study of its origin requires a multifaceted approach. Here we describe the relationship between acoustic, neutral genetic...

the alluvial fan of shahdaad in derakhtangaan river is one of the biggest alluvial fans in a dry area in northeastern kerman. this alluvial fan has been formed due to different material erosions in the drainage basin of derakhtangaan river and lying of these materials in the extreme part of this basin called dasht-e-lut (the plain of lut). the region which has been studied in this research is o...

Compressible gas flow inside a convergent-divergent nozzle and its exhaust plume atdifferent nozzle pressure ratios (NPR) have been numerically studied with severalturbulence models. The numerical results reveal that, the SST k–ω model give the bestresults compared with other models in time and accuracy. The effect of changes in value ofdivergence half-angle (ε ) on the nozzle performance, thru...

A major goal of speciation research is to reveal the genomic signatures that accompany the speciation process. Genome scans are routinely used to explore genome-wide variation and identify highly differentiated loci that may contribute to ecological divergence, but they do not incorporate spatial, phenotypic or environmental data that might enhance outlier detection. Geographic cline analysis p...

Two recent breakthroughs have dramatically improved the scope and performance of k-means clustering: squared Euclidean seeding for the initialization step, and Bregman clustering for the iterative step. In this paper, we first unite the two frameworks by generalizing the former improvement to Bregman seeding — a biased randomized seeding technique using Bregman divergences — while generalizing ...

The mathematical and physical properties of the Lamb vector divergence are explored. Toward this aim, the instantaneous and mean dynamics of the Lamb vector divergence are examined in several analytic and turbulent flow examples relative to its capacity to identify and characterize spatially localized motions having a distinct capacity to effect a time rate of change of momentum. In this contex...

BACKGROUND The cytochrome P450 (CYP) superfamily is a multifunctional hemethiolate enzyme that is widely distributed from Bacteria to Eukarya. The CYP3 family contains mainly the four subfamilies CYP3A, CYP3B, CYP3C and CYP3D in vertebrates; however, only the Actinopterygii (ray-finned fish) have all four subfamilies and detailed understanding of the evolutionary relationship of Actinopterygii ...

In this paper we present our first participation at RepLab Campaign. Our work is focused in two contributions. The first one is the use of an IR method to address Polarity and Filtering tasks. These two tasks can be seen as the same problem: to find the most relevant class to annotate a given tweet. For that, we applied a classical IR approach, using the tweet content as query against an index ...