نتایج جستجو برای: vaccine escape mutations

تعداد نتایج: 308143  

Journal: :Journal of immunology 2003
Beth D Jamieson Otto O Yang Lance Hultin Mary Ann Hausner Patricia Hultin Jose Matud Kevin Kunstman Scott Killian John Altman Kristina Kommander Bette Korber Janis Giorgi Steven Wolinsky

To investigate possible mechanisms behind HIV-1 escape from CTL, we performed detailed longitudinal analysis of Gag (SLYNTVATL)- and RT (ILKEPVHGV)-specific CTL responses and plasma epitope sequences in five individuals. Among those with CTL against consensus epitope sequences, epitope mutations developed over several years, invariably followed by decay of the CTL targeting the consensus epitop...

2017
David K. Cole Anna Fuller Garry Dolton Efthalia Zervoudi Mateusz Legut Kim Miles Lori Blanchfield Florian Madura Christopher J. Holland Anna M. Bulek John S. Bridgeman John J. Miles Andrea J. A. Schauenburg Konrad Beck Brian D. Evavold Pierre J. Rizkallah Andrew K. Sewell

Serial accumulation of mutations to fixation in the SLYNTVATL (SL9) immunodominant, HIV p17 Gag-derived, HLA A2-restricted cytotoxic T lymphocyte epitope produce the SLFNTIAVL triple mutant "ultimate" escape variant. These mutations in solvent-exposed residues are believed to interfere with TCR recognition, although confirmation has awaited structural verification. Here, we solved a TCR co-comp...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 1998
J L Heeney V J Teeuwsen M van Gils W M Bogers C De Giuli Morghen A Radaelli S Barnett B Morein L Akerblom Y Wang T Lehner D Davis

One of the obstacles to AIDS vaccine development is the variability of HIV-1 within individuals and within infected populations, enabling viral escape from highly specific vaccine induced immune responses. An understanding of the different immune mechanisms capable of inhibiting HIV infection may be of benefit in the eventual design of vaccines effective against HIV-1 variants. To study this we...

2013
Falko Schmeisser Rachel Friedman Joseph Besho Vladimir Lugovtsev Jackeline Soto Wei Wang Carol Weiss Ollie Williams Hang Xie Zhiping Ye Jerry P. Weir

AIMS AND METHODS To facilitate antigenic characterization of the influenza A 2009 pandemic H1N1 [A(H1N1)pdm09] hemagglutinin (HA), we generated a panel of murine monoclonal antibodies (mAbs) using as the immunogen mammalian-derived virus-like particles containing the HA of the A/California/04/2009 virus. The antibodies were specific for the A/California/04/2009 HA, and individual mAbs suitable ...

Journal: :Journal of virology 2012
Mark A Brockman Denis R Chopera Alex Olvera Chanson J Brumme Jennifer Sela Tristan J Markle Eric Martin Jonathan M Carlson Anh Q Le Rachel McGovern Peter K Cheung Anthony D Kelleher Heiko Jessen Martin Markowitz Eric Rosenberg Nicole Frahm Jorge Sanchez Simon Mallal Mina John P Richard Harrigan David Heckerman Christian Brander Bruce D Walker Zabrina L Brumme

An attenuation of the HIV-1 replication capacity (RC) has been observed for immune-mediated escape mutations in Gag restricted by protective HLA alleles. However, the extent to which escape mutations affect other viral proteins during natural infection is not well understood. We generated recombinant viruses encoding plasma HIV-1 RNA integrase sequences from antiretroviral-naïve individuals wit...

2017
Barbara J Harris Vera Holzmayer Huma Qureshi Mohammad Ayyub Khan Saleem Ahmed Khan Nuzhat Salamat Sarfaraz Jafri Catherine A Brennan

BACKGROUND The prevalence of chronic Hepatitis B Virus (HBV) infection is 2-4% in the Pakistani population, defining Pakistan as an intermediate prevalence country. In this study, hepatitis B surface antigen (HBsAg) reactive blood donations were screened using a combination of serological and molecular methods to identify immune escape HBV mutant strains and to determine the HBV genotypes and s...

Pertussis is still endemic and the recently resurgence of the disease caused by Bordetella pertussis has been shown in many countries. The polymorphism of the virulence genes of B. pertussis and lack of any information about the allelic variation between the Iranian isolates promotes us to analysis of the genes encoded virulence factors including ptxS1, prn, fim3 and cya to understand the diffe...

2009
Nilu Goonetilleke Michael K.P. Liu Jesus F. Salazar-Gonzalez Guido Ferrari Elena Giorgi Vitaly V. Ganusov Brandon F. Keele Gerald H. Learn Emma L. Turnbull Maria G. Salazar Kent J. Weinhold Stephen Moore Norman Letvin Barton F. Haynes Myron S. Cohen Peter Hraber Tanmoy Bhattacharya Persephone Borrow Alan S. Perelson Beatrice H. Hahn George M. Shaw Bette T. Korber Andrew J. McMichael

Identification of the transmitted/founder virus makes possible, for the first time, a genome-wide analysis of host immune responses against the infecting HIV-1 proteome. A complete dissection was made of the primary HIV-1-specific T cell response induced in three acutely infected patients. Cellular assays, together with new algorithms which identify sites of positive selection in the virus geno...

2010
Alexandra Nunes Paulo J. Nogueira Maria J. Borrego João P. Gomes

BACKGROUND Chlamydia trachomatis is one of the most disseminated human pathogens, for which no vaccine is available yet. Understanding the impact of the host pressure on pathogen antigens is crucial, but so far it was only assessed for highly-restricted geographic areas. We aimed to evaluate the evolutionary picture of the chlamydial key antigen (MOMP), which is one of the leading multi-subunit...

Journal: :Nature 2021

The Omicron (B.1.1.529) variant of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was initially identified in November 2021 South Africa and Botswana, as well a sample from traveller Hong Kong1,2. Since then, has been detected globally. This appears to be at least infectious Delta (B.1.617.2), already caused superspreader events3, outcompeted within weeks several countries metropo...

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