Many fungal pathogens undergo a yeast-hyphal transition during their pathogenic development that requires rearrangement of the cytoskeleton, followed by directed membrane traffic towards the growth region. The role of microtubules and their dynamic behavior during this process is not well understood. Here we set out to elucidate the organization, cellular role and in vivo dynamics of microtubul...

We introduce a dielectric elastomer actuator (DEA) composed of liquid-phase Gallium-Indium (GaIn) alloy electrodes embedded between layers of poly(dimethylsiloxane) (PDMS) and examine its mechanics using a specialized elastic shell theory. Residual stresses in the dielectric and sealing layers of PDMS cause the DEA to deform into a saddle-like geometry (Gaussian curvature K < 0). Applying volta...

The distribution of curvature and of bending speed along the cell's growing region are studied during steady state phototropic bending. At the start, elemental bending speed parallels the known axial distribution of growth rate. Hence regional phototropic sensitivity is initially determined by the local growth rate, and unilateral visible light acts proportionally at all levels of the growth zo...

The hoes are widely used in the farms and home gardens in the United States. Many existing hoes are not ergonomically designed because they require a lot of back bending and wrist bending during use. Back bending often causes lower back injuries, and wrist bending often causes carpal tunnel syndrome. It can be very expensive to cure these injuries. The objective of this project is to reduce bac...

DNA-bending flexibility is central for its many biological functions. A new bending restraining method for use in molecular mechanics calculations and molecular dynamics simulations was developed. It is based on an average screw rotation axis definition for DNA segments and allows inducing continuous and smooth bending deformations of a DNA oligonucleotide. In addition to controlling the magnit...

The mitochondrial genome (mtDNA) is assembled into nucleo-protein structures termed nucleoids and maintained differently compared to nuclear DNA, the involved molecular basis remaining poorly understood. In yeast (Saccharomyces cerevisiae), mtDNA is a ∼80 kbp linear molecule and Abf2p, a double HMG-box protein, packages and maintains it. The protein binds DNA in a non-sequence-specific manner, ...

Submarine channel–levee systems are among the largest sedimentary structures on the ocean floor. These channels have a sinuous pattern and are the main conduits for turbidity currents to transport sediment to the deep ocean. Recent observations have shown that their sinuosity decreases strongly with latitude, with high-latitude channels being much straighter than similar channels near the Equat...

Direct Numerical Simulations (DNS) have been conducted to study the response of initially laminar spherical premixed methane–air flame kernels to successively higher turbulence intensities at five different equivalence ratios. The numerical experiments include a 16-species/25-step skeletal mechanism for methane oxidation and a multicomponent molecular transport model. Highly turbulent condition...

We explore thermal fluctuations of thin planar membranes with a frozen spatially varying background metric and a shear modulus. We focus on a special class of D-dimensional "warped membranes" embedded in a d-dimensional space with d ≥ D + 1 and a preferred height profile characterized by quenched random Gaussian variables {h(α)(q)}, α = D + 1,...,d, in Fourier space with zero mean and a power-l...