Short Interspersed Elements (SINEs) are common in the genomes of most multicellular organisms. They transcribed by RNA polymerase III from an internal promoter comprising boxes A and B. As transcripts certain SINEs mammalian can be polyadenylated, such should contain AATAAA sequence as well those called β- τ-signals. One goals this work was to evaluate how autonomous independent other SINE part...

STEREO is a novel algorithm that discovers cis-regulatory RNA interactions by assembling complete and potentially overlapping same-strand RNA transcripts from tiling expression data. STEREO first identifies coherent segments of transcription and then discovers individual transcripts that are consistent with the observed segments given intensity and shape constraints. We used STEREO to identify ...

In the analysis and recognition of handwriting, a useful first task is to assign ground truth for words in the writing. Such an assignment is useful for various subsequent machine learning tasks for performing automatic recognition, writer verification, etc. Since automatic word segmentation and recognition can be error prone, an intermediate approach is to use a text file that is a transcripti...

there exists an association between pi3k pathway licentious activity and the considerable feature of high metastatic potential of the genitourinary cancer cells. although du 145 and 5637 have functional phosphatase and tensin homolog (pten) tumor suppressor gene, which antagonizes pi3k function, pc-3 is null for pten gene. in pursuit to explain why pten bearing cell lines display high metastati...

The anthers in flowers perform important functions in sexual reproduction. Several recent studies used microarrays to study anther transcriptomes to explore genes controlling anther development. To analyze the secretion and other functions of the tapetum, we produced transcriptomes of anthers of rice (Oryza sativa subsp. japonica) at six progressive developmental stages and pollen with sequenci...

Abstract This paper contributes to the question of how discourse relations are realised in TED talks. Drawing on an annotated, multilingual corpus talk transcripts, we examine English and Lithuanian, Portuguese Turkish translations by concentrating three aspects: degree explicitness relations, extent which explicit implicit encoded inter- or intra-sententially, whether top-level relation senses...