BACKGROUND Linkage of aged care and hospitalisation data provides valuable information on patterns of health service utilisation among aged care service recipients. Many aged care datasets in Australia contain a Statistical Linkage Key (SLK-581) instead of full personal identifiers. We linked hospital and death records using a full probabilistic strategy, the SLK-581, and three combined strateg...

Despite the widespread use of Clustering, there is distressingly little general theory of clustering available. Questions like “What distinguishes a clustering of data from other data partitioning?”, “Are there any principles governing all clustering paradigms?”, “How should a user choose an appropriate clustering algorithm for a particular task?”, etc. are almost completely unanswered by the e...

Cultural transmission of migratory traditions enables species to deal with their environment based on experiences from earlier generations. Also, it allows a more adequate and rapid response to rapidly changing environments. When individuals break with their migratory traditions, new population structures can emerge that may affect gene flow. Recently, the migratory traditions of the Barnacle G...

Once genetic linkage has been identified for a complex disease, the next step is often association analysis, in which single-nucleotide polymorphisms (SNPs) within the linkage region are genotyped and tested for association with the disease. If a SNP shows evidence of association, it is useful to know whether the linkage result can be explained, in part or in full, by the candidate SNP. We prop...

Fusiform rust resistance can involve gene-for-gene interactions where resistance (Fr) genes in the host interact with corresponding avirulence genes in the pathogen, Cronartium quercuum f.sp. fusiforme (Cqf). Here, we identify trees with Fr genes in a loblolly pine population derived from a complex mating design challenged with two Cqf inocula (one gall and 10 gall mixtures). We used single nuc...

UNLABELLED The high cost of genotyping single nucleotide polymorphisms (SNPs) generally prohibits the systematic mapping of entire genetic linkage regions in order to find the polymorphisms associated with increased risk of disease. In practice, SNPs are selected at approximately equal spacing across the linkage region to try to locate a SNP lying in the haplotype block of the disease SNP. The ...

BACKGROUND For decades, research efforts have tried to uncover the underlying genetic basis of human susceptibility to a variety of diseases. Linkage studies have resulted in highly replicated findings and helped identify quantitative trait loci (QTL) for many complex traits; however identification of specific alleles accounting for linkage remains elusive. The purpose of this study was to dete...

We present a method for hierarchical image segmentation that defines a disaffinity graph on the image, over-segments it into watershed basins, defines a new graph on the basins, and then merges basins with a modified, size-dependent version of single linkage clustering. The quasilinear runtime of the method makes it suitable for segmenting large images. We illustrate the method on the challengi...

Recent research has shown the benefits of using K -means clustering in task allocation to robots. However, there is little evaluation of other clustering techniques. In this paper we compare K -means clustering to single-linkage clustering and consider the effects of straight line and true path distance metrics in cluster formation. Our empirical results show single-linkage clustering with a tr...

To answer the question “Which clustering function should one use?” for a given task, we consider an axiomatic approach to the theory of Clustering, with special focus on uniqueness theorems characterizing popular clustering functions. We argue that such theorems can be used to decide exactly when a particular clustering function should be used or avoided. We discuss abstract properties of clust...