Analysis of the nature of the DNA sequences at the telomeres of the short arms of the human sex chromosomes suggests parallels with the structures found at telomeres of a number of lower eukaryotes. The exact nature of the end of the DNA has not yet been established but it is clear that there are multiple levels of variability both between and within individuals in this region of the genome.

UNLABELLED The human Y chromosome is the sex determining chromosome. The number of proteins associated with this chromosome is 196 and 107 of the 196 proteins have yet not been characterised. Here, we describe the analysis of these 107 proteins by computing various physicochemical properties using sequence and predicted structural data to elucidate molecular function. We present the derived dat...

On the basis of information theory and statistical methods, we use mutual information, ntuple entropy and conditional entropy, combined with biological characteristics, to analyze the long range correlation and short range correlation in human Y chromosome palindromes. The magnitude distribution of the long range correlation which can be reflected by the mutual information is P5>P5a>P5b (P5a an...

We examined variation on the nonrecombining portion of the human Y chromosome to investigate human evolution during the last 200,000 years. The Y-specific polymorphic sites included the Y Alu insertional polymorphism or "YAP" element (DYS287), the poly(A) tail associated with the YAP element, three point mutations in close association with the YAP insertion site, an A-G polymorphic transition (...

Y-box proteins belong to the cold shock domain family of proteins that are known to be involved in both transcriptional and translational control. Here, we give a brief overview of the structure, regulation and physiological functions of the Y-box proteins. This is followed by examining the role of Y-box protein 1 (YB-1), the most extensively studied of the Y-box protein in tumorigenesis, and i...

Neuropeptide Y was isolated from the porcine brain in 1982 and shown to be colocalized with noradrenaline in sympathetic nerve terminals. The peptide has been demonstrated to be present in sympathetic nerve fibers innervating the pineal gland in many mammalian species. In this investigation, we show by use of immunohistochemistry that neuropeptide Y is present in nerve fibers of the adult human...

We examined 43 biallelic polymorphisms on the nonrecombining portion of the Y chromosome (NRY) in 50 human populations encompassing a total of 2,858 males to study the geographic structure of Y-chromosome variation. Patterns of NRY diversity varied according to geographic region and method/level of comparison. For example, populations from Central Asia had the highest levels of heterozygosity, ...

Recent findings of low sequence variability of Y chromosome genes has led to suggestions that the most recent ancestor of human Y chromosomes existed around 50,000 years ago and human population size expanded about 28,000 years ago. But what level of confidence can we have in these estimates?

molecules are organic elements of information storage imbued with imperfect copying processes. Thus, they are fundamental repositories of an organism's evolutionary history. The field of human molecular evolution is predicated on the concept that patterns of DNA sequence variation in living populations encode aspects of human heritage shaped by a constellation of evolutionary influences. The fr...

All genes on the human Y-chromosome were studied using fractal dimension and Shannon entropy. Clear outlier clusters were identified. Among these were 6 sequences that have since been withdrawn as CDSs and 1 additional sequence that is not in the current assembly. A methodology for ranking the sequences based on deviation from average values of FD and SE was developed. The group of sequences sc...