نتایج جستجو برای: gene signature

تعداد نتایج: 1195406  

Journal: :Clinical cancer research : an official journal of the American Association for Cancer Research 2016
Bo Hwa Sohn Jae-Jun Shim Sang-Bae Kim Kyu Yun Jang Soo Mi Kim Ji Hoon Kim Jun Eul Hwang Hee-Jin Jang Hyun-Sung Lee Sang-Cheol Kim Woojin Jeong Sung Soo Kim Eun Sung Park Jeonghoon Heo Yoon Jun Kim Dae-Ghon Kim Sun-Hee Leem Ahmed Kaseb Manal M Hassan Minse Cha In-Sun Chu Randy L Johnson Yun-Yong Park Ju-Seog Lee

PURPOSE The Hippo pathway is a tumor suppressor in the liver. However, the clinical significance of Hippo pathway inactivation in HCC is not clearly defined. We analyzed genomic data from human and mouse tissues to determine clinical relevance of Hippo pathway inactivation in HCC. EXPERIMENTAL DESIGN We analyzed gene expression data from Mst1/2(-/-) and Sav1(-/-) mice and identified a 610-gen...

Journal: :Clinical cancer research : an official journal of the American Association for Cancer Research 2009
Melissa A Troester Myung Hee Lee Matthew Carter Cheng Fan David W Cowan Erick Roman Perez Jason R Pirone Charles M Perou D Joseph Jerry Sallie Smith Schneider

PURPOSE Cancer progression is mediated by processes that are also important in wound repair. As a result, cancers have been conceptualized as overhealing wounds or "wounds that do not heal," and gene expression signatures reflective of wound repair have shown value as predictors of breast cancer survival. Despite the widespread acknowledgment of commonalities between host responses to wounds an...

2018
Chengbin Ma Wenying Zhang Qiongwei Wu Yu Liu Chao Wang Guoying Lao Longtao Yang Ping Liu

BACKGROUND The aim of this study is to find the potential miRNA expression signature capable of predicting survival time for cervical squamous cell carcinoma (CSCC) patients. METHODS The expression of 332 miRNAs was measured in 131 (Training cohort) and 130 (Validation cohort) patients with CSCC in the Cancer Genome Atlas (TCGA) data portal. The miRNA expression signature was identified by Co...

2010
N.V. Strunnikova A. Maminishkis J.J. Barb F. Wang C. Zhi Y. Sergeev W. Chen A.O. Edwards D. Stambolian G. Abecasis A. Swaroop P.J. Munson S.S. Miller

Retinal pigment epithelium (RPE) is a polarized cell layer critical for photoreceptor function and survival. The unique physiology and relationship to the photoreceptors make the RPE a critical determinant of human vision. Therefore, we performed a global expression profiling of native and cultured human fetal and adult RPE and determined a set of highly expressed 'signature' genes by comparing...

2012
Sun Tian Paul Roepman Vlad Popovici Magali Michaut Ian Majewski Ramon Salazar Cristina Santos Robert Rosenberg Ulrich Nitsche Wilma E Mesker Sjoerd Bruin Sabine Tejpar Mauro Delorenzi Rene Bernards Iris Simon

Microsatellite instability (MSI) occurs in 10-20% of colorectal tumours and is associated with good prognosis. Here we describe the development and validation of a genomic signature that identifies colorectal cancer patients with MSI caused by DNA mismatch repair deficiency with high accuracy. Microsatellite status for 276 stage II and III colorectal tumours has been determined. Full-genome exp...

Journal: :Frontiers in Cell and Developmental Biology 2021

Background: Cancer-associated fibroblasts (CAFs) are mainly involved in cancer progression and treatment failure. However, the specific signature of CAFs their related clinicopathological parameters renal cell carcinoma (RCC) remain unclear. Here, methods to recognize gene signatures were employed roughly assess infiltration RCC, based on data from The Cancer Genome Atlas (TCGA). Weighted Gene ...

Journal: :Pigment cell research 2007
Peter Johansson Sandra Pavey Nicholas Hayward

Mutations in the BRAF oncogene occur in the majority of melanomas, leading to the activation of the mitogen-activated protein kinase pathway and the transcription of downstream effectors. As BRAF and its effectors could be good melanoma therapy targets, defining the repertoire of genes that are differentially regulated because of BRAF mutational activation is an important objective. Towards thi...

Journal: :Breast care 2012
Steffi Hartmann Bernd Gerber Dirk Elling Kristin Heintze Toralf Reimer

BACKGROUND: The aim of this article was to evaluate the prognostic value of the MammaPrint(TM) signature in women $$ 60 years with invasive breast cancer. PATIENTS AND METHODS: 60 female patients were included in this prospective study. Eligibility criteria included: pT1c-3, pN0-1a, grade 2/3, hormone receptor-positive and HER2-negative tumor. The clinical risk was determined by Adjuvant! Onli...

Journal: :Pulmonary circulation 2016
Christian Bime Tong Zhou Ting Wang Marvin J Slepian Joe G N Garcia Louise Hecker

Sepsis-related multiple organ dysfunction syndrome is a leading cause of death in intensive care units. There is overwhelming evidence that oxidative stress plays a significant role in the pathogenesis of sepsis-associated multiple organ failure; however, reactive oxygen species (ROS)-associated biomarkers and/or diagnostics that define mortality or predict survival in sepsis are lacking. Lung ...

Journal: :Clinical cancer research : an official journal of the American Association for Cancer Research 2007
Jill E Larsen Sandra J Pavey Linda H Passmore Rayleen V Bowman Nicholas K Hayward Kwun M Fong

PURPOSE Improving outcomes for early-stage lung cancer is a major research focus at present because a significant proportion of stage I patients develop recurrent disease within 5 years of curative-intent lung resection. Within tumor stage groups, conventional prognostic indicators currently fail to predict relapse accurately. EXPERIMENTAL DESIGN To identify a gene signature predictive of rec...

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