Transcription factors (TFs) play important roles in plant growth, development, and responses to environmental stress. In this study, we collected 1,455 full-length (FL) cDNAs of TFs, representing 45 families, from wheat and its relatives Triticum urartu, Aegilops speltoides, Aegilops tauschii, Triticum carthlicum, and Triticum aestivum. More than 15,000 T0 TF FOX (Full-length cDNA Over-eXpressi...

Direct sequencing of polymerase chain reaction products is now an expanding area of plant systematics and evolution. Within angiosperms the rbcL gene has been widely sequenced and used for inferring plant phylogenies at higher taxonomic levels. Unfortunately rbcL does not usually contain enough information to resolve relationships between closely related genera, such as Hordeum, Triticum, and A...

RNA editing is an important way to convert cytidine (C) to uridine (U) at specific sites within RNA molecules at a post-transcriptional level in the chloroplasts of higher plants. Although it has been systematically studied in many plants, little is known about RNA editing in the wheat D genome donor Aegilops tauschii L. Here, we investigated the chloroplast RNA editing of Ae. tauschii and comp...

Doubled haploid (DH) populations are useful to scientists and breeders in both crop improvement and basic research. Current methods of producing DHs usually need in vitro culture for extracting haploids and chemical treatment for chromosome doubling. This report describes a simple method for synthesizing DHs (SynDH) especially for allopolyploid species by utilizing meiotic restitution genes. Th...

Colchicine has been applied to young developing anthers of Triticum aestivtim at varying stages of maturity from the last premeiotic mitoses of the archesporial and tapetal cells to the second meiotic divisions of the pollen mother cells. The developmental stage of the archesporium at which colchicine took effect was determined by cytological examination of the ploidy levels of the nuclei of th...

Few genes are available to develop drought-tolerant bread wheat (Triticum aestivum L.) cultivars. One way to enhance bread wheat's genetic diversity would be to take advantage of the diversity of wild species by creating synthetic hexaploid wheat (SW) with the genomic constitution of bread wheat. In this study, we compared the expression of traits encoded at different ploidy levels and evaluate...

The diversity and evolution of wheat (Triticum-Aegilops group) genomes is determined, in part, by the activity of transposable elements that constitute a large fraction of the genome (up to 90%). In this study, we retrieved sequences from publicly available wheat databases, including a 454-pyrosequencing database, and analyzed 18,217 insertions of 18 Stowaway-like miniature inverted-repeat tran...

The wild-relative gene pools of wheat are a rich source of genetic variation for wheat improvement.Karyotypes of eight genotypes of Triticum monococcum subsp. aegilopoides and eight genotypes of Aegilops cylindrica,which grown wild next to each other in different regions in the west of Iran were studied. Root tips were treated in α-bromonaphthalene solution, fixed in chromic acid-formaldehyde f...

The identification of nested motifs in genomic sequences is a complex computational problem. The detection of these patterns is important to allow the discovery of transposable element (TE) insertions, incomplete reverse transcripts, deletions, and/or mutations. In this study, a de novo strategy for detecting patterns that represent nested motifs was designed based on exhaustive searches for pa...

In this note, using Calabi’s method, we construct rotationally symmetric KählerRicci solitons on the total space of direct sum of fixed hermitian line bundle and its projective compactification, where the curvature of hermitian line bundle is Kähler-Einstein. These examples generalize the construction of Koiso, Cao and Feldman-Ilmanen-Knopf. 1 A little motivation In [1], the authors constructed...