نتایج جستجو برای: admixture

تعداد نتایج: 5019  

Journal: :Journal of computational biology : a journal of computational molecular cell biology 2010
Sivan Bercovici Dan Geiger

Abstract Admixture mapping is a gene mapping approach used for the identification of genomic regions harboring disease susceptibility genes in the case of recently admixed populations such as African Americans. We present a novel method for admixture mapping, called admixture aberration analysis (AAA) that uses a DNA pool of affected admixed individuals. We demonstrate through simulations that ...

2017
Karolina Węcek Stefanie Hartmann Johanna L. A. Paijmans Ulrike Taron Georgios Xenikoudakis James A. Cahill Peter D. Heintzman Beth Shapiro Gennady Baryshnikov Aleksei N. Bunevich Jennifer J. Crees Roland Dobosz Ninna Manaserian Henryk Okarma Małgorzata Tokarska Samuel T. Turvey Jan M. Wójcik Waldemar Żyła Jacek M. Szymura Michael Hofreiter Axel Barlow

Retracing complex population processes that precede extreme bottlenecks may be impossible using data from living individuals. The wisent (Bison bonasus), Europe's largest terrestrial mammal, exemplifies such a population history, having gone extinct in the wild but subsequently restored by captive breeding efforts. Using low coverage genomic data from modern and historical individuals, we inves...

2017
Nina Hollfelder Carina M Schlebusch Torsten Günther Hiba Babiker Hisham Y Hassan Mattias Jakobsson

Northeast Africa has a long history of human habitation, with fossil-finds from the earliest anatomically modern humans, and housing ancient civilizations. The region is also the gate-way out of Africa, as well as a portal for migration into Africa from Eurasia via the Middle East and the Arabian Peninsula. We investigate the population history of northeast Africa by genotyping ~3.9 million SNP...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2010
Katarzyna Bryc Christopher Velez Tatiana Karafet Andres Moreno-Estrada Andy Reynolds Adam Auton Michael Hammer Carlos D Bustamante Harry Ostrer

Hispanic/Latino populations possess a complex genetic structure that reflects recent admixture among and potentially ancient substructure within Native American, European, and West African source populations. Here, we quantify genome-wide patterns of SNP and haplotype variation among 100 individuals with ancestry from Ecuador, Colombia, Puerto Rico, and the Dominican Republic genotyped on the I...

2011
Guolian Kang Guimin Gao Sanjay Shete David T. Redden Bao-Li Chang Timothy R. Rebbeck Jill S. Barnholtz-Sloan Nicholas M. Pajewski David B. Allison

As genome-wide association studies expand beyond populations of European ancestry, the role of admixture will become increasingly important in the continued discovery and fine-mapping of variation influencing complex traits. Although admixture is commonly viewed as a confounding influence in association studies, approaches such as admixture mapping have demonstrated its ability to highlight dis...

Journal: :Current Opinion in Genetics & Development 2018

2014
Erik Eschbach Arne W Nolte Klaus Kohlmann Petra Kersten Jochem Kail Robert Arlinghaus

In addition to ecological factors, evolutionary processes can determine the invasion success of a species. In particular, genetic admixture has the potential to induce rapid evolutionary change, which can result from natural or human-assisted secondary contact between differentiated populations. We studied the recent range expansion of zander in Germany focusing on the interplay between invasio...

2012
Federico Sánchez-Quinto Laura R. Botigué Sergi Civit Conxita Arenas María C. Ávila-Arcos Carlos D. Bustamante David Comas Carles Lalueza-Fox

One of the main findings derived from the analysis of the Neandertal genome was the evidence for admixture between Neandertals and non-African modern humans. An alternative scenario is that the ancestral population of non-Africans was closer to Neandertals than to Africans because of ancient population substructure. Thus, the study of North African populations is crucial for testing both hypoth...

2015
Catarina Xavier Juan José Builes Verónica Gomes Jose Miguel Ospino Juliana Aquino Walther Parson António Amorim Leonor Gusmão Ana Goios

Genetic diversity of present American populations results from very complex demographic events involving different types and degrees of admixture. Through the analysis of lineage markers such as mtDNA and Y chromosome it is possible to recover the original Native American haplotypes, which remained identical since the admixture events due to the absence of recombination. However, the decrease i...

2015
Pengfei Qin Ying Zhou Haiyi Lou Dongsheng Lu Xiong Yang Yuchen Wang Li Jin Yeun-Jun Chung Shuhua Xu

Historical records indicate that extensive cultural, commercial and technological interaction occurred between European and Asian populations. What have been the biological consequences of these contacts in terms of gene flow? We systematically estimated gene flow between Eurasian groups using genome-wide polymorphisms from 34 populations representing Europeans, East Asians, and Central/South A...

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