نتایج جستجو برای: takifugu oblongus

تعداد نتایج: 588  

Journal: :Molecular biology and evolution 2004
Erik Richly Dario Leister

Mitochondrial DNA sequences are frequently transferred to the nucleus giving rise to the so-called nuclear mitochondrial DNA (NUMT). Analysis of 13 eukaryotic species with sequenced mitochondrial and nuclear genomes reveals a large interspecific variation of NUMT number and size. Copy number ranges from none or few copies in Anopheles, Caenorhabditis, Plasmodium, Drosophila, and Fugu to more th...

Journal: :Journal of Fisheries and Marine Sciences Education 2014

Journal: :Marine genomics 2014
Samuel E Fox Mark R Christie Melanie Marine Henry D Priest Todd C Mockler Michael S Blouin

Identifying the traits that differ between hatchery and wild fish may allow for pragmatic changes to hatchery practice. To meet those ends, we sequenced, assembled, and characterized the anadromous steelhead (Oncorhynchus mykiss) transcriptome. Using the Illumina sequencing platform, we sequenced nearly 41million 76-mer reads representing 3.1 Gbp of steelhead transcriptome. Upon final assembly,...

Journal: :Genome research 2003
Melody S Clark Yvonne J K Edwards Dan Peterson Sandra W Clifton Amanda J Thompson Masahide Sasaki Yutaka Suzuki Kiyoshi Kikuchi Shugo Watabe Koichi Kawakami Sumio Sugano Greg Elgar Stephen L Johnson

The draft Fugu rubripes genome was released in 2002, at which time relatively few cDNAs were available to aid in the annotation of genes. The data presented here describe the sequencing and analysis of 24,398 expressed sequence tags (ESTs) generated from 15 different adult and juvenile Fugu tissues, 74% of which matched protein database entries. Analysis of the EST data compared with the Fugu g...

Journal: :Genome research 1999
G Elgar M S Clark S Meek S Smith S Warner Y J Edwards N Bouchireb A Cottage G S Yeo Y Umrania G Williams S Brenner

We have generated and analyzed >50,000 shotgun clones from 1059 Fugu cosmid clones. All sequences have been minimally edited and searched against protein and DNA databases. These data are all displayed on a searchable, publicly available web site at. With an average of 50 reads per cosmid, this is virtually nonredundant sequence skimming, covering 30%-50% of each clone. This essentially random ...

Journal: :Genomics 2005
Francis Poulin Marcelo A Nobrega Ingrid Plajzer-Frick Amy Holt Veena Afzal Edward M Rubin Len A Pennacchio

Genomic sequence comparisons among human, mouse, and pufferfish (Takifugu rubripes (Fugu)) have revealed a set of extremely conserved noncoding sequences. While this high degree of sequence conservation suggests severe evolutionary constraint and predicts a lack of tolerance to change to retain in vivo functionality, such elements have been minimally explored experimentally. In this study, we d...

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