نتایج جستجو برای: ssr enrichment libraries

تعداد نتایج: 87836  

Journal: :3 Biotech 2016
Pratik Satya Pramod Kumar Paswan Swagata Ghosh Snehalata Majumdar Nasim Ali

Cross-species transferability is a quick and economic method to enrich SSR database, particularly for minor crops where little genomic information is available. However, transferability of SSR markers varies greatly between species, genera and families of plant species. We assessed confamiliar transferability of SSR markers from cotton (Gossypium hirsutum) and jute (Corchorus olitorius) to 22 s...

2017
Benjun Hou Suping Feng Yaoting Wu

This research aimed to systematically identify and preliminarily validate the Hevea brasiliensis expressed sequence tag (EST) information using Simple Sequence Repeat (SSR) and provide evidence for further development of SSR molecular marker. The definition of general SSR features of Hevea EST splicing sequences and development of SSR primers founded the basis of diversity analysis and variety ...

2016
Jian Wu Qing Zhao Sheng Liu Muhammad Shahid Lei Lan Guangqin Cai Chunyu Zhang Chuchuan Fan Youping Wang Yongming Zhou

Sclerotinia stem rot (SSR) caused by the necrotrophic fungus Sclerotinia sclerotiorum is a major disease in rapeseed (Brassica napus) worldwide. Breeding for SSR resistance in B. napus, as in other crops, relies only on germplasms with quantitative resistance genes. A better understanding of the genetic basis for SSR resistance in B. napus thus holds promise for the genetic improvement of disea...

Journal: :DNA Research: An International Journal for Rapid Publication of Reports on Genes and Genomes 2009
Jun-ichi Yonemaru Tsuyu Ando Tatsumi Mizubayashi Shigemitsu Kasuga Takashi Matsumoto Masahiro Yano

Simple sequence repeat (SSR) markers with a high degree of polymorphism contribute to the molecular dissection of agriculturally important traits in sorghum (Sorghum bicolor (L.) Moench). We designed 5599 non-redundant SSR markers, including regions flanking the SSRs, in whole-genome shotgun sequences of sorghum line ATx623. (AT/TA)n repeats constituted 26.1% of all SSRs, followed by (AG/TC)n a...

Journal: :Genetics 2006
Martin Ligr Rahul Siddharthan Fredrick R Cross Eric D Siggia

Genomewide techniques to assay gene expression and transcription factor binding are in widespread use, but are far from providing predictive rules for the function of regulatory DNA. To investigate more intensively the grammar rules for active regulatory sequence, we made libraries from random ligations of a very restricted set of sequences. Working with the yeast Saccharomyces cerevisiae, we d...

Journal: :Genetics 2004
D Zhang D W Choi S Wanamaker R D Fenton A Chin M Malatrasi Y Turuspekov H Walia E D Akhunov P Kianian C Otto K Simons K R Deal V Echenique B Stamova K Ross G E Butler L Strader S D Verhey R Johnson S Altenbach K Kothari C Tanaka M M Shah D Laudencia-Chingcuanco P Han R E Miller C C Crossman S Chao G R Lazo N Klueva J P Gustafson S F Kianian J Dubcovsky M K Walker-Simmons K S Gill J Dvorák O D Anderson M E Sorrells P E McGuire C O Qualset H T Nguyen T J Close

A total of 37 original cDNA libraries and 9 derivative libraries enriched for rare sequences were produced from Chinese Spring wheat (Triticum aestivum L.), five other hexaploid wheat genotypes (Cheyenne, Brevor, TAM W101, BH1146, Butte 86), tetraploid durum wheat (T. turgidum L.), diploid wheat (T. monococcum L.), and two other diploid members of the grass tribe Triticeae (Aegilops speltoides ...

Journal: :The Journal of clinical endocrinology and metabolism 1999
L J Hofland Q Liu P M Van Koetsveld J Zuijderwijk F Van Der Ham R R De Krijger A Schonbrunn S W Lamberts

Although in situ hybridization has been used to examine the distribution of messenger RNA for somatostatin receptor subtypes (sst) in human tumors, the cellular localization of sst1 and sst2A receptors has not been reported. In this study, we describe the cellular localization of human sst1 and sst2A receptor proteins in both cryostat- and paraffin-embedded sections of 25 human tumor tissues us...

2016
Wenjun Tang Jun Qin Kun Yang Shaomin Liu Ning Lu Xiaolei Niu

Cloud parameters (cloud mask, effective particle radius, and liquid/ice water path) are the important inputs in estimating surface solar radiation (SSR). These parameters can be derived from MODIS with high accuracy, but their temporal resolution is too low to obtain high-temporalresolution SSR retrievals. In order to obtain hourly cloud parameters, an artificial neural network (ANN) is applied...

2009
S. Zhong Y. Leng T. L. Friesen J. D. Faris L. J. Szabo

Zhong, S., Leng, Y., Friesen, T. L., Faris, J. D., and Szabo, L. J. 2009. Development and characterization of expressed sequence tag-derived microsatellite markers for the wheat stem rust fungus Puccinia graminis f. sp. tritici. Phytopathology 99:282-289. Puccinia graminis f. sp. tritici is the causal agent of stem rust disease in wheat. The rust fungus has caused devastating disease epidemics ...

2006
Mahdi Hedayati

An SSR problem has been noticed and caused repeated triggering of the protection. A study indicated that SSR conditions might appear for some network configurations. Thyristor Controlled Series Capacitor (TCSC) was found to eliminate the problem. The paper discusses the problem and introduce different types of protective relays for mitigation of SSR.

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