DNA methylation is an important epigenetic modification in many species that is critical for development, and implicated in ageing and many complex diseases, such as cancer. Many cost-effective genome-wide analyses of DNA modifications rely on restriction enzymes capable of digesting genomic DNA at defined sequence motifs. There are hundreds of restriction enzyme families but few are used to da...

background and objectives: varicella–zoster virus (vzv) is a human herpes virus that usually attacks young children and commonly causes chicken pox (varicella). following primary infection, a lifelong latent infection is established. the virus often reactivates during adulthood or senesces to cause shingles (zoster). little is known regarding the genotypes of varicella in kuwait. the aim of thi...

Reproducible, discriminative, high-throughput methods are required for the identification of bacterial strains and isolates in a clinical environment. A new molecular typing method for bacteria was developed and tested on Salmonella and E. coli species. The technique is called subtracted restriction fingerprinting and is based on double restriction enzyme digestion of genomic DNA followed by en...

Terminal restriction fragment length polymorphism (TRFLP) is an increasingly popular method in molecular ecology. However, several key limitations of this method have not been fully examined especially when used to study fungi. We investigated the impact of spore contamination, intracollection ribosomal DNA internal transcribed spacer (ITS) region variation, and conserved restriction enzyme rec...

A procedure was developed for the selection of spontaneous mutants of Bacillus stearothermophilus NUB31 that are more efficient than the wild type in the restriction of phage at elevated temperatures. Inactivation studies revealed that two mutants contained a more thermostable restriction enzyme and one mutant contained three times more enzyme than the wild type. The restriction endonucleases f...

conclusion the high discriminative power of hsp65 pattern particularly hpaii digestion, provide an exact and costeffective method for rapid identification of m. simiae strains among registered pulmonary cases. results of 962 culture positive specimens, 17(1.7%) were identified as m. simiae species; majority of them were multidrug-resistance (12; 70.5%). the overall detection rate by tb11, tb12 ...

Precise DNA manipulation is critical for molecular biotechnology. Restriction enzyme-based approaches are limited by their requirement of specific enzyme sites. Restriction-free cloning has greatly improved the flexibility and speed of precise DNA assembly. Most of these approaches focus on DNA assembly rather than gene removal. Here we present a polymerase chain reaction (PCR)-based cloning me...

The MspI restriction endonuclease is a type II restriction enzyme. Unlike all other restriction enzymes with known structures, MspI recognizes the palindromic tetranucleotide sequence 5'-C/CGG and cleaves it as indicated by the '/' to produce DNA products with 5' two-base overhangs. Owing to the nature of its cleavage pattern, it is likely that MspI would represent a new structural class of res...

Since the last compilation of restriction enzymes, (1) 442 new entries have been added including 13 new specificities. A complete list of these new enzymes can be found in Table I. With the growing size of the restriction enzyme database and the recognition that the most widespread use of the information is as a database for computer programs predicting restriction enzyme cleavage patterns, Tab...