نتایج جستجو برای: multiplex pcr assay

تعداد نتایج: 377256  

2010
Hiroshi Fukushima Jun Kawase Yoshiki Etoh Kumiko Sugama Shunshuke Yashiro Natsuko Iida Keiji Yamaguchi

A set of 8 multiplex real-time SYBR Green PCR (SG-PCR) assays including 3 target primers and an internal amplification control (IAC) primer was simultaneously evaluated in 3 h or less with regard to detection of 24 target genes of 23 foodborne pathogens in 7 stool specimens of foodborne outbreak using a 96-well reaction plate. This assay, combined with DNA extraction (QIAamp DNA Stool Mini kit)...

Esmaeil Saberfar, Mirlatif Mosavi, Mohammad M. Forghani-Fard,

Avian influenza virus (AIV) infection is a major cause of bird or human mortality and morbidity, therefore the rapid identification of the virus is of important clinical and epidemiological implication. Methods: A multiplex Reverse Transcriptase PCR (RT-PCR) was optimized for the detection of influenza A virus and the H5 and H9 subtypes. The influenza type A specific primers were directed to t...

Journal: :Journal of clinical microbiology 2005
Cherie T Ng Carol A Gilchrist Ariel Lane Shantanu Roy Rashidul Haque Eric R Houpt

Two major genotypic assemblages of Giardia lamblia infect humans; the epidemiologic significance of this phenomenon is poorly understood. We developed a single-vessel multiplex real-time PCR (qPCR) assay that genotypes Giardia infections into assemblages A and/or B directly from fecal samples. The assay utilized Scorpion probes that combined genotype-specific primers and probes for the 18S rRNA...

Journal: :PeerJ 2016
Rashi Gautam Slavica Mijatovic-Rustempasic Mathew D Esona Ka Ian Tam Osbourne Quaye Michael D Bowen

Background. Group A rotavirus (RVA) infection is the major cause of acute gastroenteritis (AGE) in young children worldwide. Introduction of two live-attenuated rotavirus vaccines, RotaTeq® and Rotarix®, has dramatically reduced RVA associated AGE and mortality in developed as well as in many developing countries. High-throughput methods are needed to genotype rotavirus wild-type strains and to...

Journal: :Journal of clinical microbiology 2009
Thomas Iftner Liesje Germ Ryan Swoyer Susanne Kruger Kjaer J Gabrielle Breugelmans Christian Munk Frank Stubenrauch Joseph Antonello Janine T Bryan Frank J Taddeo

Human papillomavirus (HPV) DNA genotyping is an essential test to establish efficacy in HPV vaccine clinical trials and HPV prevalence in natural history studies. A number of HPV DNA genotyping methods have been cited in the literature, but the comparability of the outcomes from the different methods has not been well characterized. Clinically, cytology is used to establish possible HPV infecti...

2017
Le Wang Zhishan Feng Mengchuan Zhao Shuo Yang Xiaotong Yan Weiwei Guo Zhongren Shi Guixia Li

BACKGROUND Diagnosis of community-acquired pneumonia (CAP) caused by Mycoplasma pneumoniae (Mp) in children has been hampered by difficulty in obtaining convalescent serum and time constraints. In this study, the two diagnostic assays that targeted respectively on Mp-antibody and Mp-DNA were retrospectively investigated. METHODS A total of 3146 children were clinically diagnosed to have CAP a...

2013
Valéria S Moustacas Teane MA Silva Luciana F Costa Mariana N Xavier Custódio A Carvalho Érica A Costa Tatiane A Paixão Renato L Santos

BACKGROUND Infectious ovine epididymitis results in substantial economic losses worldwide due to reproductive failure and culling of breeders. The most common causative agents of these infections are Brucella ovis, Actinobacillus seminis, and Histophilus somni. The aim of this study was to develop a multiplex PCR assay for simultaneous detection of Brucella ovis, Actinobacillus seminis, and His...

2017
Daniel Li Kimberly Wilkins Andrea M. McCollum Lynda Osadebe Joelle Kabamba Beatrice Nguete Toutou Likafi Marcel Pie Balilo Robert Shongo Lushima Jean Malekani Inger K. Damon Michael C. L. Vickery Elisabeth Pukuta Frida Nkawa Stomy Karhemere Jean-Jacques Muyembe Tamfum Emile Wemakoy Okitolonda Yu Li Mary G. Reynolds

Monkeypox virus (MPXV), a zoonotic orthopoxvirus (OPX), is endemic in the Democratic Republic of Congo (DRC). Currently, diagnostic assays for human monkeypox (MPX) focus on real-time quantitative polymerase chain reaction (PCR) assays, which are typically performed in sophisticated laboratory settings. Herein, we evaluated the accuracy and utility of a multiplex MPX assay using the GeneXpert p...

Journal: :Journal of virological methods 2016
Xiaowen Zheng Gaopeng Liu Tanja Opriessnig Zining Wang Zongqi Yang Yonghou Jiang

Porcine bocavirus (PBoV), a newly described porcine parvovirus, has received attention because it can be commonly identified in clinically affected pigs including pigs with post-weaning multisystemic wasting syndrome (PWMS) and pigs with diarrhea. In recent years, novel PBoVs have been identified and were classified into three genogroups, but the ability to detect and classify these novel PBoVs...

2012
Seyed Mahmoud Amin Marashi Bahram Nasr Esfahani Akbar Tavakoli Sharareh Moghim Mohammad Reza Pourshafie Mansoor Salehi

OBJECTIVES Amongst the various antibiotic resistant elements in Vibrio. cholerae, SXT constin (SXT-C) is important. We were going to design a quick method for determination of antibiotic resistance gene pattern in SXT-C. MATERIALS AND METHODS Ninety four V. cholerae O1 El Tor isolates were used in this study. Antibiotic susceptibility testing, multiplex PCR amplification of SXT-C containing d...

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