A tempered stable Lévy process combines both the α–stable and Gaussian trends. In a short time frame it is close to an α–stable process while in a long time frame it approximates a Brownian motion. In this paper we consider a general and robust class of multivariate tempered stable distributions and establish their identifiable parametrization. We prove short and long time behavior of tempered ...

Approximate Bayesian Computational (ABC) methods, or likelihood-free methods, have appeared in the past fifteen years as useful methods to perform Bayesian analysis when the likelihood is analytically or computationally intractable. Several ABC methods have been proposed: MCMC methods have been developed by Marjoram et al. [2003] and by Bortot et al. [2007] for instance, and sequential methods ...

This paper introduces the parallel hierarchical sampler (PHS), a Markov chain Monte Carlo algorithm using several chains simultaneously. The connections between PHS and the parallel tempering (PT) algorithm are illustrated, convergence of PHS joint transition kernel is proved and and its practical advantages are emphasized. We illustrate the inferences obtained using PHS, parallel tempering and...

Sampling from high-dimensional systems often suffers from the curse of dimensionality. In this paper, we explored the use of sequential structures in sampling from high-dimensional systems with an aim at eliminating the curse of dimensionality, and proposed an algorithm, so-called sequential parallel tempering as an extension of parallel tempering. The algorithm was tested with the witch's hat ...

We apply a recently developed adaptive algorithm that systematically improves the efficiency of parallel tempering or replica exchange methods in the numerical simulation of small proteins. Feedback iterations allow us to identify an optimal set of temperatures/replicas which are found to concentrate at the bottlenecks of the simulations. A measure of convergence for the equilibration of the pa...

Multicanonical MCMC (Multicanonical Markov Chain Monte Carlo; Multicanonical Monte Carlo) is discussed as a method of rare event sampling. Starting from a review of the generic framework of importance sampling, multicanonical MCMC is introduced, followed by applications in random matrices, random graphs, and chaotic dynamical systems. Replica exchange MCMC (also known as parallel tempering or M...

Simulated tempering (ST) is an established Markov Chain Monte Carlo (MCMC) methodology for sampling from a multimodal density π(θ). The technique involves introducing an auxiliary variable k taking values in a finite subset of [0, 1] and indexing a set of tempered distributions, say π k (θ) ∝ π(θ) k. Small values of k encourage better mixing, but samples from π are only obtained when the joint ...

This article provides a brief review of recent developments in Markov chain Monte Carlo methodology. The methods discussed include the standard Metropolis-Hastings algorithm, the Gibbs sampler, and various special cases of interest to practitioners. It also devotes a section on strategies for improving mixing rate of MCMC samplers, e.g., simulated tempering, parallel tempering, parameter expans...

By combining different ideas, a general and efficient protocol to deal with discontinuous phase transitions at low temperatures is proposed. For small T's, it is possible to derive a generic analytic expression for appropriate order parameters, whose coefficients are obtained from simple simulations. Once in such regimes simulations by standard algorithms are not reliable; an enhanced tempering...