نتایج جستجو برای: 16s rrna gene sequencing

تعداد نتایج: 1225373  

Journal: :Journal of clinical microbiology 2009
Abdulwahed Ahmed Hassan Hivda Ulbegi-Mohyla Talah Kanbar Jörg Alber Christoph Lämmler Amir Abdulmawjood Michael Zschöck Reinhard Weiss

The present study was designed to characterize phenotypically and genotypically seven Arcanobacterium haemolyticum strains obtained from infections of six horses. All seven strains showed the cultural and biochemical properties typical of A. haemolyticum and were susceptible to most of the antibiotics tested. The species identification could be confirmed by amplification and sequencing of the 1...

2015
Kirsten A. Ziesemer Allison E. Mann Krithivasan Sankaranarayanan Hannes Schroeder Andrew T. Ozga Bernd W. Brandt Egija Zaura Andrea Waters-Rist Menno Hoogland Domingo C. Salazar-García Mark Aldenderfer Camilla Speller Jessica Hendy Darlene A. Weston Sandy J. MacDonald Gavin H. Thomas Matthew J. Collins Cecil M. Lewis Corinne Hofman Christina Warinner

To date, characterization of ancient oral (dental calculus) and gut (coprolite) microbiota has been primarily accomplished through a metataxonomic approach involving targeted amplification of one or more variable regions in the 16S rRNA gene. Specifically, the V3 region (E. coli 341-534) of this gene has been suggested as an excellent candidate for ancient DNA amplification and microbial commun...

Journal: :International journal of systematic bacteriology 1999
E T Wang P van Berkum X H Sui D Beyene W X Chen E Martínez-Romero

Fifty-five Chinese isolates from nodules of Amorpha fruticosa were characterized and compared with the type strains of the species and genera of bacteria which form nitrogen-fixing symbioses with leguminous host plants. A polyphasic approach, which included RFLP of PCR-amplified 16S rRNA genes, multilocus enzyme electrophoresis (MLEE), DNA-DNA hybridization, 16S rRNA gene sequencing, electropho...

2015
Hee Bong Shin Jihoon Yoon Yangsoon Lee Myung Sook Kim Kyungwon Lee

PURPOSE The genus Aeromonas is a pathogen that is well known to cause severe clinical illnesses, ranging from gastroenteritis to sepsis. Accurate identification of A. hydrophila, A. caviae, and A. veronii is important for the care of patients. However, species identification remains difficult using conventional methods. The aim of this study was to compare the accuracy of different methods of i...

Journal: :Applied and environmental microbiology 2010
Brandon K Swan Christopher J Ehrhardt Kristen M Reifel Lilliana I Moreno David L Valentine

Sulfidic, anoxic sediments of the moderately hypersaline Salton Sea contain gradients in salinity and carbon that potentially structure the sedimentary microbial community. We investigated the abundance, community structure, and diversity of Bacteria and Archaea along these gradients to further distinguish the ecologies of these domains outside their established physiological range. Quantitativ...

2011
Brian Austin

Bacterial taxonomy has progressed from reliance on highly artificial culture-dependent techniques involving the study of phenotype (including morphological, biochemical and physiological data) to the modern applications of molecular biology, most recently 16S rRNA gene sequencing, which gives an insight into evolutionary pathways (= phylogenetics). The latter is applicable to culture-independen...

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