نتایج جستجو برای: signature sequence
تعداد نتایج: 468007 فیلتر نتایج به سال:
8-Oxoguanine, a common mutagenic DNA lesion, generates G:C>T:A transversions via mispairing with adenine during DNA replication. When operating normally, the MUTYH DNA glycosylase prevents 8-oxoguanine-related mutagenesis by excising the incorporated adenine. Biallelic MUTYH mutations impair this enzymatic function and are associated with colorectal cancer (CRC) in MUTYH-Associated Polyposis (M...
Transfer ribonucleic acids (tRNAs) are challenging to identify and quantify from unseparated mixtures. Our lab previously developed the signature digestion approach for identifying tRNAs without specific separation. Here we describe the combination of relative quantification via enzyme-mediated isotope labeling with this signature digestion approach for the relative quantification of tRNAs. The...
In this paper, a new two-phase scheme for video similarity detection is proposed. For each video sequence, we extract two kinds of signatures with different granularities: coarse and fine. Coarse signature is based on the Pyramid Density Histogram (PDH) technique and fine signature is based on the Nearest Feature Trajectory (NFT) technique. In the first phase, most of unrelated video data are f...
SUMMARY Internet traffic classification is an essential step for stable service provision. The payload signature classifier is considered a reliable method for Internet traffic classification but is prohibitively compu-tationally expensive for real-time handling of large amounts of traffic on high-speed networks. In this paper, we describe several design techniques to minimize the search space ...
We present a software tool which efficiently computes the error probability of a direct sequence, code division multiple access (DS/CDMA) system. Several different system models are analyzed including random signature sequences with ideal channels, deterministic signature sequences with ideal channels, random signature sequences with slowly fading channels, and deterministic signature sequences...
land cover change constitutes one of main way of alteration of soil organic matter in both quantitative and qualitative terms. the goal of this study was to compare the carbon stock and the isotopic signature of the organic matter in the soil of areas with different land use, covered with forest and grass (pasture). the study area is located at sorocaba, sp, brazil. using un-deformed soil sampl...
Detecting similarities between local binding surfaces can facilitate identification of enzyme binding sites and prediction of enzyme functions, and aid in our understanding of enzyme mechanisms. Constructing a template of local surface characteristics for a specific enzyme function or binding activity is a challenging task, as the size and shape of the binding surfaces of a biochemical function...
We describe methods for automatically identifying signature blocks and reply lines in plain-text email messages. This analysis has many potential applications, such as preprocessing email for text-to-speech systems; anonymization of email corpora; improving automatic content-based mail classifiers; and email threading. Our method is based on applying machine learning methods to a sequential rep...
We present here the notion of signature of trees and of languages, and its relationships with the theory of numeration systems. The signature of an ordered infinite tree (of bounded degree) is an infinite (bounded) sequence of integers, the sequence of the degrees of the nodes taken in the visit order of the canonical breadth-first traversal of the tree. A prefix-closed language defines such a ...
Sequencing pathogen genomes is costly, demanding careful allocation of limited sequencing resources. We built a computational Sequencing Analysis Pipeline (SAP) to guide decisions regarding the amount of genomic sequencing necessary to develop high-quality diagnostic DNA and protein signatures. SAP uses simulations to estimate the number of target genomes and close phylogenetic relatives (near ...
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