Vision begins with photoisomerization of visual pigments. Thermal energy can complement photon energy to drive photoisomerization, but it also triggers spontaneous pigment activation as noise that interferes with light detection. For half a century, the mechanism underlying this dark noise has remained controversial. We report here a quantitative relation between a pigment's photoactivation ene...

The trans-cis photoisomerization of azobenzene-containing materials is key to a number of photomechanical applications, but the actual conversion mechanism in condensed phases is still largely unknown. Herein, we study the n, pi* isomerization in a vacuum and in various solvents via a modified molecular dynamics simulation adopting an ab initio torsion-inversion force field in the ground and ex...

Photoisomerization, that is, a photochemical reaction leading to a change of molecular structure after absorption of a photon, can have detrimental effects such as leading to DNA damage under solar irradiation, or as a limiting factor for the efficiency of solar cells. Here, we show that strong coupling of organic molecules to a confined light mode can be used to strongly suppress photoisomeriz...

We use time-resolved two-photon photoemission to study two molecular photoswitches at the Au(111) surface, namely azobenzene and its derivative tetra-tert-butyl-azobenzene (TBA). Electronic states located at the substrate–adsorbate interface are found to be a sensitive probe for the photoisomerization of TBA. In contrast to TBA, azobenzene loses its switching ability at the Au(111) surface. Bes...

Azobenzene incorporated into DNA has a photoisomerization quantum yield that depends on the DNA sequence near the azobenzene attachment site. We use Molecular Dynamics computer simulations to elucidate which physical properties of the modified DNA determine the quantum yield. We show for a wide range of DNA sequences that the photoisomerization quantum yield is strongly correlated with the vari...

The laser-initiated thermal (optothermal) switching of cholesteric liquid crystals (CLCs) is characterized by using different azobenzene (Azo) derivatives and laser wavelengths. Under 405-nm laser irradiation, Azo-doped CLCs undergo phase transition from cholesteric to isotropic. No cis-to-trans photoisomerization occurs when the 405-nm laser irradiation is blocked because only a single laser i...

We establish the role of tether conductivity on the photoisomerization of azobenzene-functionalized molecules assembled as isolated single molecules in well-defined decanethiolate self-assembled monolayer matrices on Au{111}. We designed the molecules so as to tune the conductivity of the tethers that separate the functional moiety from the underlying Au substrate. By employing surface-enhanced...

Molecular motors convert light and thermal energies into mechanical work, offering good opportunities to design novel molecular devices. Among them, alternate a photoisomerization helix inversion achieve unidirectional rotation. The rotational speed is limited by the step, which in turn governed barrier electronic ground state. In this we systematically study solvation effect on process of sele...

Abstract In this essay, we aim to illustrate how Martin Karplus and his research group effectively set in motion the engine of molecular dynamics (MD) simulations biomolecules. This process saw its prodromes between 1969 early 1970s with Karplus’ landing biology, a transition that came fruition treatment 11- cis -retinal photoisomerization development an allosteric model account for mechanism c...