Rhizosphere chemistry is the sum of root exudation chemicals, their breakdown products and the microbial products of soil-derived chemicals. To date, most studies about root exudation chemistry are based on sterile cultivation systems, which limits the discovery of microbial breakdown products that act as semiochemicals and shape microbial rhizosphere communities. Here, we present a method for ...

The food source of sediment-ingesting animals is a subject of controversy, centering on the notion that the microbial biomass in sediments is insufficient to support caloric need. Gizzard shad Dorosoma cepedianum are omnivorous, sediment-ingesting fish that frequently impact the trophic structure of temperate lake and reservoir food webs. Prior gut content analyses of this fish have typically d...

Mounting evidence suggests that natural microbial communities exhibit a high level of spatial organization at the micrometric scale that facilitate ecological interactions and support biogeochemical cycles. Microbial patterns are difficult to study definitively in natural environments due to complex biodiversity, observability and variable physicochemical factors. Here, we examine how trophic d...

Microbes in the atmosphere (microbial aerosols) play an important role in climate and provide an ecological and biogeochemical connection between oceanic, atmospheric, and terrestrial environments. However, the sources and environmental factors controlling the concentration, diversity, transport, and viability of microbial aerosols are poorly understood. This study examined culturable microbial...

the number of vegetable processing plants has been increased during recent years in iran as many other countries. on the other hand, fresh vegetable products are susceptible to microbial contamination after harvest, processing, handling, packing and distribution. the aim of this study was to determine and evaluate the level of microbial load of vegetables during different cleaning steps in a fr...

Colorectal cancer (CRC) is the second most common cause of cancer death in the western world. An effective screening program leading to early detection of disease would severely reduce the mortality of CRC. Alterations in the gut microbiota have been linked to CRC, but the potential of microbial markers for use in CRC screening has been largely unstudied. We used a nested case-control study of ...

Domestication took plants from natural environments to agro-ecosystems, where resources are generally plentiful and plant life is better buffered against environmental risks such as drought or pathogens. We hypothesized that predictions derived from the comparison of low vs high resource ecosystems (faster-growing plants promoting faster nutrient cycling in the latter) extrapolate to the proces...

[1] The production of CO2 by soil microorganisms is an important component of the global carbon cycle, and its temperature sensitivity is poorly constrained in global models. To improve our understanding of the factors controlling the temperature dependence of soil microbial respiration, we analyzed the temperature sensitivity of labile soil organic carbon decomposition for 77 soils collected f...

Increased vegetative growth and soil carbon (C) storage under elevated carbon dioxide concentration ([CO2]) has been demonstrated in a number of experiments. However, the ability of ecosystems, either aboveor belowground, to maintain increased C storage relies on the response of soil processes, such as those that control nitrogen (N) mineralization, to climatic change. These soil processes are ...

The ability of Shewanella decolorationis S12 to obtain energy for growth by coupling the oxidation of various electron donors to dissimilatory azoreduction was investigated. This microorganism can reduce a variety of azo dyes by use of formate, lactate, pyruvate, or H(2) as the electron donor. Furthermore, strain S12 grew to a maximal density of 3.0 x 10(7) cells per ml after compete reduction ...