نتایج جستجو برای: genogroup

تعداد نتایج: 702  

2015
Shinichiro Shibata Tsuyoshi Sekizuka Akari Kodaira Makoto Kuroda Kei Haga Yen Hai Doan Reiko Takai-Todaka Kazuhiko Katayama Takaji Wakita Tomoichiro Oka Hiroyuki Hirata

Sapoviruses, members of the family Caliciviridae, are genetically highly diverse. We report here the first complete genome sequence of a genogroup V genotype 2 sapovirus strain, NGY-1, detected from fecal samples of a suspected foodborne gastroenteritis outbreak, determined using a metagenomic sequencing approach.

Journal: :Journal of clinical microbiology 2016
Martin C W Chan Kirsty Kwok Tin-Nok Hung Paul K S Chan

Two commonly used norovirus enzyme immunoassays have reduced diagnostic performance, with clinical sensitivities ranging from 11% to 35% for the detection of the recently emerging genogroup II genotype 17 (GII.17) Kawasaki 2014 variant that caused the majority of infections in Asia during the winter of 2014 to 2015. False-negative results can compromise infection control and patient management.

2010
João Rodrigo Mesquita Leslie Barclay Maria São José Nascimento Jan Vinjé

To identify the prevalence and genetic variability of noroviruses in dogs, we tested fecal samples by using reverse transcription-PCR. We found canine norovirus in 40% and 9% of dogs with and without diarrhea, respectively. The virus was genetically unrelated to other noroviruses and constitutes a tentative new genogroup.

2012
Lore E. Lee Elizabeth A. Cebelinski Candace Fuller William E. Keene Kirk Smith Jan Vinjé John M. Besser

We tested fecal samples from 93 norovirus-negative gastroenteritis outbreaks; 21 outbreaks were caused by sapovirus. Of these, 71% were caused by sapovirus genogroup IV and 66% occurred in long-term care facilities. Future investigation of gastroenteritis outbreaks should include multi-organism testing.

Journal: :Emerging Infectious Diseases 1999
E. Rydkina V. Roux N. Rudakov M. Gafarova I. Tarasevich D. Raoult

Dermacentor nuttallii from Siberia, Rhipicephalus sanguineus from Crimea, and Rh. pumilio from the Astrakhan region were infected with Rickettsia sibirica (12%), R. conorii (8%), and the Astrakhan fever agent (3%), respectively. Three new Rickettsiae of the R. massiliae genogroup were identified in ticks by 16S rDNA, gltA, and ompA sequencing.

Journal: :Emerging Infectious Diseases 2000
M. K. Arness B. H. Feighner M. L. Canham D. N. Taylor S. S. Monroe T. J. Cieslak E. L. Hoedebecke C. S. Polyak J. C. Cuthie R. L. Fankhauser C. D. Humphrey T. L. Barker C. D. Jenkins D. R. Skillman

An outbreak of acute gastroenteritis hospitalized 99 (12%) of 835 U. S. Army trainees at Fort Bliss, El Paso, Texas, from August 27 to September 1, 1998. Reverse transcriptase polymerase chain reaction tests for Norwalk-like virus were positive for genogroup 2. Gastroenteritis was associated with one post dining facility and with soft drinks.

Journal: :Journal of clinical microbiology 2001
C D Kirkwood R F Bishop

Reverse transcription-PCR and sequence analysis identified calciviruses in 32 of 60 stool specimens (negative for other enteric pathogens) obtained from children admitted to our hospital with acute gastroenteritis. The overall annual incidence rate for calcivirus was 9% (32 of 354 children). Molecular analysis identified 30 "Norwalk-like virus" genogroup II (predominantly Lordsdale cluster) and...

2018
Kentaro Tohma Mayuko Saito Holger Mayta Mirko Zimic Cara J Lepore Lauren A Ford-Siltz Robert H Gilman Gabriel I Parra

Norovirus, a leading cause of acute gastroenteritis in humans, is a highly diverse virus. Here, we report the complete genome sequence of a nontypeable genogroup II (GII) norovirus that was detected in a symptomatic Peruvian child in 2008. This virus showed low nucleotide sequence identities (≤82%) against all known genotypes.

Journal: :Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2011
Rishi Desai Catherine Yen Mary Wikswo Nicole A Gregoricus Jace E Provo Umesh D Parashar Aron J Hall

In December 2010, 24 players and staff members from 13 National Basketball Association teams were affected with gastroenteritis symptoms. Four of 5 stool specimens from ill players and staff tested positive for norovirus genogroup II. We document evidence of transmission both within teams and, potentially, between teams in 2 instances.

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