Centrifuge is a novel microbial classification engine that enables rapid, accurate, and sensitive labeling of reads and quantification of species on desktop computers. The system uses an indexing scheme based on the Burrows-Wheeler transform (BWT) and the Ferragina-Manzini (FM) index, optimized specifically for the metagenomic classification problem. Centrifuge requires a relatively small index...

In order to fully understand scientific test data it is crucial that we first understand the background centrifuge operational environment and its variation with time and centrifugal acceleration. For example, changes in ambient air temperature or relative humidity in the centrifuge chamber during operation can have a significant impact on the evaporation levels of water from the surface of a c...

In this study, low-bandgap polymer poly{[4,4-bis(2-ethylhexyl)-cyclopenta-(2,1-b;3,4-b')dithiophen]-2,6-diyl-alt-(2,1,3-benzothiadiazole)-4,7-diyl} (PCPDTBT) nanostructures have been synthesized via a hard nanoporous alumina template of centrifugal process. Centrifuge has been used to infiltrate the PCPDTBT solution into the nanoporous alumina by varying the rotational speeds. The rotational sp...

The water retention curve, which relates the matric potential, ?, to content, ?, is essential describe flow processes in unsaturated zone and provides useful information for environmental engineering applications. There are few studies devoted measuring rock curves due rock’s tightness, makes it more technically difficult use specific methods. In this study, we tested four different methods mea...

earthquakes could have catastrophic impacts on tunnels and buried structures. liquefaction phenomenon is one of the most destructive effects of earthquakes. liquefaction results in decreasing effective stress and this consequently leads to decreases in shear strength of the soil. as a result, large deformation in both soil and buried structure occurs. moreover, liquefaction causes soil boiling,...

The centrifuge method for measuring the resistance of xylem to cavitation by water stress was modified to also account for any additional cavitation that might occur from a freeze-thaw cycle. A strong correlation was found between cavitation by freezing and mean conduit diameter. On the one extreme, a tracheid-bearing conifer and diffuse-porous angiosperms with small-diameter vessels (mean diam...