MOTIVATION The analysis of large biological datasets often requires complex processing pipelines that run for a long time on large computational infrastructures. We designed and implemented a simple script-like programming language with a clean and minimalist syntax to develop and manage pipeline execution and provide robustness to various types of software and hardware failures as well as port...

The Human Connectome Project (HCP) faces the challenging task of bringing multiple magnetic resonance imaging (MRI) modalities together in a common automated preprocessing framework across a large cohort of subjects. The MRI data acquired by the HCP differ in many ways from data acquired on conventional 3 Tesla scanners and often require newly developed preprocessing methods. We describe the mi...

Two types of Pseudomonas putida PpG2 mutants which were unable to degrade branched-chain amino acids were isolated after mutagenesis and selection for ability to grow on succinate, but not valine, as a sole source of carbon. These isolates were characterized by growth on the three branched-chain amino acids (valine, isoleucine, and leucine), on the corresponding branched-chain keto acids (2-ket...

Modern practice of solving the problems of heat supply system design generates the need to solve the problem of choosing optimal parameters for a considerable set of equipment. The problem of choosing optimal parameters involves determining the diameters of new heat pipelines, searching for the methods to reconstruct existing network sections, and choosing the pressure heads of pumping stations...

Most existing HLT pipelines assume the input is pure text or, at most, HTML and either ignore (logical) document structure or remove it. We argue that identifying the structure of documents is essential in digital library and other types of applications, and show that it is relatively straightforward to extend existing pipelines to achieve ones in which the structure of a document is preserved.

One grotesque catfish specimen was collected in Zhangjiang River (upper reach of a secondary tributary of Hongshuihe River) in Libo County, Guizhou Province, China. This specimen bears surprising character of four dorsal fins, which have not appeared in any other silurid fishes. But other morphological characters, such as two pairs of barbels, lower jaw projecting beyond upper jaw, the first do...

One grotesque catfish specimen was collected in Zhangjiang River (upper reach of a secondary tributary of Hongshuihe River) in Libo County, Guizhou Province, China. This specimen bears surprising character of four dorsal fins, which have not appeared in any other silurid fishes. But other morphological characters, such as two pairs of barbels, lower jaw projecting beyond upper jaw, the first do...