Contents 1. Introduction 2. The pelagic food web 2.1 The structure of the pelagic food web. 2.2 Phytoplankton community structure. 2.2.1 Bottom up determinants of phytoplankton size structure. 2.2.2 Top-down determinants of phytoplankton size structure. 2.3 Zooplankton of marine pelagic food webs 2.3.1 Protozoa. 2.3.2 Copepoda. 2.3.3 Tunicata. 2.3.4 Mesozooplankton feeding selectivity. 2.3.5 He...

Citation: Avó AP, Daniell TJ, Neilson R, Oliveira S, Branco J and Adão H (2017) DNA Barcoding and Morphological Identification of Benthic Nematodes Assemblages of Estuarine Intertidal Sediments: Advances in Molecular Tools for Biodiversity Assessment. Front. Mar. Sci. 4:66. doi: 10.3389/fmars.2017.00066 DNA Barcoding and Morphological Identification of Benthic Nematodes Assemblages of Estuarine...

The distribution and the structure of benthic assemblages vary with latitude. However, few studies have described benthic communities along large latitudinal gradients, and patterns of variation are not fully understood. Taiwan, lying between 21.90°N and 25.30°N, is located at the center of the Philippine-Japan arc and lies at the northern margin of coral reef development. A wide range of habit...

The extent to which Marine Protected Areas (MPAs) benefit corals is contentious. On one hand, MPAs could enhance coral growth and survival through increases in herbivory within their borders; on the other, they are unlikely to prevent disturbances, such as terrestrial runoff, that originate outside their boundaries. We examined the effect of spatial protection and terrestrial sediment on the be...

Current concern about biodiversity change associated with human impacts has raised scientific interest in the role of biodiversity in ecosystem functioning. However, studies on this topic face the challenge of evaluating and separating the relative contributions of biodiversity and environment to ecosystem functioning in natural environments. To investigate this problem, we collected sediment c...

Although much research has focused on acoustic mapping and exploration of the benthic environment, little is known about the acoustic ecology of benthic organisms, particularly benthic crustaceans. Through the use of a coupled audio–video system, a hydrophone array, and an autonomous recording unit, we tested several hypotheses about the field acoustics of a benthic marine crustacean, Hemisquil...

Cuttlefish, Sepia officinalis, commonly use their visually-guided, rapid adaptive camouflage for multiple tactics to avoid detection or recognition by predators. Two common tactics are background matching and resembling an object (masquerade) in the immediate area. This laboratory study investigated whether cuttlefish preferentially camouflage themselves to resemble a three-dimensional (3D) obj...

Oxygen deficiency in the near-bottom water associated with eutrophication has been shown to have negative impacts on marine benthos in many Scandinavian waters. In the present study, the benthic fauna and the sedimentary habitat have been studied between 7 and 34 m depth; at 14 stations in three Swedish fjords in four different years, and at 12 stations along the Swedish coast in three differen...

[1] Stable isotope and elemental measurements were conducted on foraminifera from a sequence of calcareous pelagic ooze at Ocean Drilling Program Site 1209 to document the thermal evolution of the North Pacific water column over Shatsky Rise and to address long-standing questions about the nature of oceanic circulation in the early Paleogene. A major change in seasonality and water column struc...

Paleocene–Eocene warming and changes in oceanic hydrography should have significantly impacted the ecology of marine microorganisms, both at the surface and on the seafloor. We analyzed several key characteristics of foraminifera from two Shatsky Rise (ODP Leg 198) cores spanning the P/E boundary including the maximum test diameters of the largest calcareous trochospiral benthic foraminifera an...