In many relevant path planning problems, loop closure constraints reduce the configuration space to a manifold embedded in the higher-dimensional joint ambient space. Whereas many progresses have been done to solve path planning problems in the presence of obstacles, only few work consider loop closure constraints. In this paper, we present the AtlasRRT algorithm, a planner specially tailored f...

Low-rank image decomposition has the potential to address a broad range of challenges that routinely occur in clinical practice. Its novelty and utility in the context of atlas-based analysis stems from its ability to handle images containing large pathologies and large deformations. Potential applications include atlas-based tissue segmentation and unbiased atlas building from data containing ...

Subject-specific modeling is increasingly important in biomechanics simulation. However, how to automatically create highquality finite element (FE) mesh and how to automatically impose boundary conditionare challenging. This paper presents a statistical atlas based approach for automatic meshing of subject-specific shapes. In our approach, shape variations among a shape population are explicit...

An 18 year old man with congenital basilar invagination developed multiple lower cranial nerve (CN) palsies including CN IX to XII after a traffic accident. Computed tomography of his skull base revealed a two part atlas Jefferson fracture. Normally, lower cranial nerves (CN IX-XII) pass through a space between the styloid process and the atlas transverse process. Atlas burst fractures rarely c...

The paper is a presentation of the current state of development for the Atlas of Physiology and Pathophysiology (Atlas). Our main aim is to provide a novel interactive multimedia application that can be used for biomedical education where (a) simulations are combined with tutorials and (b) the presentation layer is simplified while the underlying complexity of the model is retained. The develop...

Different imaging modalities or protocols of a single patient may convey different types of information regarding a disease for the same anatomical organ/tissue. On the other hand, multi-modal/multi-protocol medical images from several different patients can also provide spatial statistics of the disease occurrence, which in turn can greatly aid in disease diagnosis and aid in improved, accurat...

The human ventral visual stream consists of several areas that are considered processing stages essential for perception and recognition. A fundamental microanatomical feature differentiating areas is cytoarchitecture, which refers to the distribution, size, and density of cells across cortical layers. Because cytoarchitectonic structure is measured in 20-micron-thick histological slices of pos...

A new finite atlas of overlapping balanced canonical forms for multivariate discrete-time loss-less systems is presented. The canonical forms have the property that the controllability matrix ispositive upper triangular up to a suitable permutation of its columns. This is a generalization of asimilar balanced canonical form for continuous-time lossless systems. It is shown that this...

BACKGROUND Multiple fractures of the atlas and axis are rare. The management of multiple fragment axis fractures and unstable atlas fractures is still challenging for the spinal surgeon. There are no published reports of similar fractures with 3-part fracture of axis associated with an unstable atlas fracture. CASE SUMMARY We present a patient with concurrent axis and atlas fractures, which h...

We present a hierarchical object–based deformable atlas, a promising new approach for the automatic localization and quantitative analysis of neuroanatomy in MR images. The 3D finite element-based elastic atlas combines the advantages of both volumetric– and surface– based deformable atlases in one single unifying framework. This multiresolution framework is not only capable of deforming entire...