The taxonomic structure of yeast communities was studied in forest litter and soil, as well as in substrates transformed by the activity of Lumbricus terrestris earthworms (leaves in heaps, the gut contents, and coproliths). The activity of L. terrestris has a weak effect on the total yeast abundance but results in substantial changes in the community taxonomic composition. The share of ascomyc...

Macropores and water flow in soils and substrates are complex and are related to topics like preferential flow, nonequilibrium flow, and dual-continuum. Hence, the quantification of the number of macropores and the determination of their geometry are expected to provide a better understanding on the effects of pores on the soil's physical and hydraulic properties. This exploratory study aimed a...

The microbial ecology of soil still presents a challenge to microbiologists attempting to establish the ways in which bacteria and fungi actively metabolise substrates, link into food webs and recycle plant and animal remains and provide essential nutrients for plants. Extraction and in situ analysis of rRNA has enabled identification of active taxa, and detection of mRNA has provided an insigh...

Soil microbial diversity represents the largest global reservoir of novel microorganisms and enzymes. In this study, we coupled functional metagenomics and DNA stable-isotope probing (DNA-SIP) using multiple plant-derived carbon substrates and diverse soils to characterize active soil bacterial communities and their glycoside hydrolase genes, which have value for industrial applications. We inc...

Fusarium commune sp. nov. was isolated from soil and Pisum sativum in Denmark and several widespread locations within the northern hemisphere from diverse substrates including white pine, Douglas fir, carnation, corn, carrot, barley and soil. Fusarium commune is characterized by and distinguished from its putative sister taxon, the F. oxysporum complex, in having long, slender monophialides and...

The Biolog technique was introduced into ecological studies to estimate metabolic potential of microbial communities. while utilizing carbon substrates (95 or 31x3, depending on the plate type), microbes reduce a colourless dye to violet formazan. The colour is measured spectrophotometrically. This is a rapid and quite convenient method but it has many drawbacks – for example, only microbes tha...

Most areas are exposed to landscaping by tipping and excavation. The reasons for this are numerous. New substrates are the body of soil formation. These soils are young and not much developed or stratified into horizons. Accumulation of humus will be visible, indicating that the soils are already sinks for carbon dioxide. An adverse characteristic of soils tipped in the last 30 to 40 years is s...

Growth (length, biomass and mean growth rate) and reproduction (total duration, clitellum appearance, clitellum completion, cocoon commencement, rate of cocoon production, incubation period, hatching success and mean number of hatching per cocoon) of indigenous Lampito mauritii (Kinberg) in comparison with exotic Eudrilus eugeniae (Kinberg) cultured on three feed substrates-clay loam soil, cowd...

Proper protocol for mycorrhizal inoculation of container grown landscape trees is uncertain. Therefore, vegetative and commercial spore inoculum of Pisolithus tinctorius were applied to Quercus palustris (pin oak) and Q. coccinea (scarlet oak) seedlings. All plants were grown in containers filled with 0.9 liters of milled pine bark, sterilized milled pine bark, sterilized mineral soil, or steri...

UNLABELLED Phosphorus (P) plays a fundamental role in the physiology and biochemistry of all living things. Recent evidence indicates that organisms in the oceans can break down and use P forms in different oxidation states (e.g., +5, +3, +1, and -3); however, information is lacking for organisms from soil and sediment. The Cuatro Ciénegas Basin (CCB), Mexico, is an oligotrophic ecosystem with ...