Background:Isolates of Staphylococcus aureus express a myriad of adhesive surface proteins that play important role in colonization of the bacteria on nasal and skin surfaces, beginning the process of pathogenesis. The aim of this study was to screen several of the Microbial Surface Components Recognizing Adhesive Matrix Molecules (MSCRAMMs) genes among the isolate of S. a...

This paper introduces a new design and application for direct volume manipulation for visualizing the intraoperative liver resection process. So far, interactive volume deformation and resection have been independently handled due to the difficulty of representing elastic behavior of volumetric objects. Our framework models global shape editing and discontinuous local deformation by merging pro...

To operate in the extreme cold, ion channels from psychrophiles must have evolved structural changes to compensate for their thermal environment. A reasonable assumption would be that the underlying adaptations lie within the encoding genes. Here, we show that delayed rectifier K(+) channel genes from an Antarctic and a tropical octopus encode channels that differ at only four positions and dis...

The enzymatic conversion of adenosine-to-inosine (A-to-I) in RNA rewrites the informational output of a number of different classes of coding and non-coding RNA transcripts. In this issue, Decher et al (2010) reveal a new functional consequence for an ancient RNA editing site in certain animal voltage-gated K channel (Kv) genes. Abundant highly unsaturated fatty acids (HUFAs), which are essenti...

The henipaviruses, Nipah virus (NiV) and Hendra virus (HeV), are highly pathogenic zoonotic paramyxoviruses. Like many other paramyxoviruses, henipaviruses employ a process of co-transcriptional mRNA editing during transcription of the phosphoprotein (P) gene to generate additional mRNAs encoding the V and W proteins. The C protein is translated from the P mRNA, but in an alternate reading fram...

Tolerance to dsDNA is achieved through editing of Ig receptors that react with dsDNA. Nevertheless, some B cells with anti-dsDNA receptors escape editing and migrate to the spleen. Certain anti-dsDNA B cells that are recovered as hybridomas from the spleens of anti-dsDNA H chain transgenic mice also bind an additional, Golgi-associated antigen. B cells that bind this antigen accumulate intracel...

Introduction The overlap of spectra in magnetic resonance spectroscopy limits the unambiguous identification and quantification of metabolites. Two of the most employed approaches involve fitting with a known basis set [1] and spectral editing [2]. Alternatively, multidimensional correlation spectroscopy [3] does not need to assume a certain basis set, nor needs to filter-out metabolites as in ...

We have cloned a Kv2 potassium channel from squid optic lobe termed sqKv2. Multiple overlapping sqKv2 cDNA clones differed from one another at specific positions by purine transitions. To test whether the purine transitions were generated by RNA editing, we compared a 360 nucleotide genomic sequence with corresponding cDNA sequences (encoding S4-S6) isolated from individual animals and lying on...

Adenosine deaminases that act on RNA (ADARs) are RNA-editing enzymes that deaminate adenosines to create inosines in double-stranded RNA (dsRNA). Here we demonstrate that ADARs are not required for RNA interference (RNAi) and that they do not antagonize the pathway to a detectable level when RNAi is initiated by injecting dsRNA. We find, however, that transgenes expressed in the somatic tissues...

Reeb graphs provide a method for studying the shape of a manifold by encoding the evolution and arrangement of level sets of a simple Morse function defined on the manifold. Since their introduction in computer graphics they have been gaining popularity as an effective tool for shape analysis and matching. In this context one question deserving attention is whether Reeb graphs are robust agains...