نتایج جستجو برای: 16s rrna gene sequencing

تعداد نتایج: 1225373  

Background: Listeria is a Gram-positive, non-spore forming, facultative anaerobic intracellular bacterium. The most important pathogens in mammals include Listeria monocytogenes and Listeria ivanovii. The former generally causes disease and death in both humans and animals while the latter performs sporadically and primarily causes illness in ruminant...

Journal: :iranian journal of microbiology 0
v noaman center for ticks and tick- borne diseases, faculty of veterinary medicine, university of tehran, tehran, iran and veterinary department of isfahan research center for agriculture and natural resources, isfahan, iran. p shayan center for ticks and tick- borne diseases, faculty of veterinary medicine, university of tehran, tehran, iran.

background and objectives: anaplasma phagocytophilum is a zoonotic, tick borne rickettsial pathogen. a. phagocytophilum has been detected in north america, europe, africa and asia by molecular methods. in iran we have little information about the distribution of this agent in human and animals. materials and methods: from march 2007 to july 2007, one hundred and fifty blood samples and correspo...

Journal: :research in molecular medicine 0
vahid noaman amirieh town, p. o. box: 81785-199 abdolreza nabinejad amirhossein shahmoradi veterinary research department, isfahan agriculture and natural resources research and education center, areeo, isfahan, iran saeid esmaeilkhanian veterinary research department, isfahan agriculture and natural resources research and education center, areeo, isfahan, iran

background: a. bovis and a. phagocytophilium are leukocytotropic agents of bovine anaplasmosis. they are obligate intracellular bacteria that can infect and cause anaplasmosis in human and animals. therefore, this study was carried out to detect a. bovis and a. phagocytophilum in naturally infected dairy cattle in isfahan using molecular techniques. materials and methods: in this study a total ...

Journal: :Journal of clinical microbiology 2010
Joann L Cloud Dag Harmsen Peter C Iwen James J Dunn Gerri Hall Paul Rocco Lasala Karen Hoggan Deborah Wilson Gail L Woods Alexander Mellmann

Correct identification of nonfermenting Gram-negative bacilli (NFB) is crucial for patient management. We compared phenotypic identifications of 96 clinical NFB isolates with identifications obtained by 5' 16S rRNA gene sequencing. Sequencing identified 88 isolates (91.7%) with >99% similarity to a sequence from the assigned species; 61.5% of sequencing results were concordant with phenotypic r...

2012
PAVAN KUMAR PINDI

This paper aims at the analysis of viable bacteria in potable water. Bacteria are the most diverse living beings on earth and only a fraction of them have been identified. The study aims to analyze bacterial abundance in potable water. Sample collection was carried out in 13 different places of Mahabubnagar district of Andhra Pradesh, India. The species were identified based on morphology, bioc...

2012
Jason D. Gans John Dunbar Stephanie A. Eichorst La Verne Gallegos-Graves Murray Wolinsky Cheryl R. Kuske

Environmental biosurveillance and microbial ecology studies use PCR-based assays to detect and quantify microbial taxa and gene sequences within a complex background of microorganisms. However, the fragmentary nature and growing quantity of DNA-sequence data make group-specific assay design challenging. We solved this problem by developing a software platform that enables PCR-assay design at an...

Journal: :Applied and environmental microbiology 2016
Nikea Ulrich Abigail Rosenberger Colin Brislawn Justin Wright Collin Kessler David Toole Caroline Solomon Steven Strutt Erin McClure Regina Lamendella

UNLABELLED Bacterial community composition and longitudinal fluctuations were monitored in a riverine system during and after Superstorm Sandy to better characterize inter- and intracommunity responses associated with the disturbance associated with a 100-year storm event. High-throughput sequencing of the 16S rRNA gene was used to assess microbial community structure within water samples from ...

2017
Heather P McLaughlin Blake Cherney Janetta R Hakovirta Rachael A Priestley Andrew Conley Andrew Carter David Hodge Segaran P Pillai Linda M Weigel Gilbert J Kersh David Sue

Coxiella burnetii is a human pathogen that causes the serious zoonotic disease Q fever. It is ubiquitous in the environment and due to its wide host range, long-range dispersal potential and classification as a bioterrorism agent, this microorganism is considered an HHS Select Agent. In the event of an outbreak or intentional release, laboratory strain typing methods can contribute to epidemiol...

Journal: :Journal of applied microbiology 2006
D F Moore M H Zhowandai D M Ferguson C McGee J B Mott J C Stewart

AIMS To compare accuracy of genus and species level identification of presumptive enterococci isolates from the marine environment using conventional biochemical testing, four commercial identification systems and 16S rRNA sequence analysis. METHODS AND RESULTS Ninety-seven environmental bacterial isolates identified as presumptive enterococci on mEI media were tested using conventional and E...

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