Alternative splicing (AS) is an important post-transcriptional mechanism that can increase protein diversity and affect mRNA stability and translation efficiency. Many studies targeting the regulation of alternative splicing have focused on individual motifs; however, little is known about how such motifs work in concert. In this paper, we use distribution-based quantitative association rule mi...

The abstract goes here.

The detection of very similar patterns in a time series, commonly called motifs, has received continuous and increasing attention from diverse scientific communities. In particular, recent approaches for discovering similar motifs of different lengths have been proposed. In this work, we show that such variable-length similarity-based motifs cannot be directly compared, and hence ranked, by the...

M.C. Escher is noted for his repeating patterns, usually with animal motifs. For a few motifs he created more than one pattern with different combinatorial characteristics, even in different geometries, leading to the concept of families of patterns with the same motif but different combinatorics. Hyperbolic geometry is useful in that it provides an infinite number of combinatorial possibilitie...

vii Acknowledgements viii Chapter

The search for patterns or motifs in data represents an area of key interest to many researchers. In this paper we present the Motif Tracking Algorithm, a novel immune inspired pattern identification tool that is able to identify variable length unknown motifs which repeat within time series data. The algorithm searches from a neutral perspective that is independent of the data being analysed a...

The Peptaibol Database is a sequence and structure resource for the unusual class of peptides known as peptaibols. These peptides exhibit antibiotic and membrane channel-forming activities. The database includes sequence, biological source and bibliographical data for the naturally occurring peptaibols. Information is also collated for the growing number of peptaibol 3D structures determined by...

Tujuan pengabdian ini untuk memberikan pendampingan guru-guru dalam membuat batik kreatif di atas kayu. Metode adalah metode community based participatory research (CBPR). Peserta yang mengikuti pelatihan berjumlah 42 orang. Hasilnya para guru dapat menciptakan motif-motif berupa flora seperti motif bunga-bunga, fauna burung, ataupun objek geometris yaitu susunan bidang-bidang segiempat, segiti...

The problem of recognizing motifs from biological data has been well-studied and numerous algorithms, both exact and approximate, have been proposed to address the underlying issue. We strongly believe that open availability and ease of accessibility of quality implementations for such algorithms are critical to the research community, in order to directly reproduce and utilize the results from...