The present study involves a novel computational technique, regarding simultaneous use of the pseudo particle method, Poisson integral method and a special-purpose computer originally designed for molecular dynamics simulations (MDGRAPE-3). In the present calculations, the dynamics of two colliding vortex rings have been studied using the vortex method. The present acceleration technique allows...

The thermal conductivity of insulating (dielectric) crystals is computed almost exclusively on the basis of the phonon Boltzmann equation. We refer to [1] for a discussion more complete than possible in this contribution. On the microscopic level the starting point is the Born-Oppenheimer approximation (see [2] for a modern version), which provides an effective Hamiltonian for the slow motion o...

The fundamental partial differential equations that govern the equilibrium mechanics of multi-dimensional media are the Laplace equation and its inhomogeneous counterpart, the Poisson equation. The Laplace equation is arguably the most important differential equation in all of applied mathematics. It arises in an astonishing variety of mathematical and physical systems, ranging through fluid me...

The derivation d T on the exterior algebra of forms on a manifold M with values in the exterior algebra of forms on the tangent bundle T M is extended to multivector fields. These tangent lifts are studied with applications to the theory of Poisson structures, their symplectic foliations, canonical vector fields and Poisson-Lie groups. 0. Introduction. A derivation d T on the exterior algebra o...

Hamiltonian Lie-Poisson structures of the three-wave equations associated with the Lie algebras su(3) and su(2, 1) are derived and shown to be compatible. Poisson reduction is performed using the method of invariants and geometric phases associated with the reconstruction are calculated. These results can be applied to applications of nonlinear-waves in, for instance, nonlinear optics. Some of ...

The force required to rupture the streptavidin-biotin complex was calculated here by computer simulations. The computed force agrees well with that obtained by recent single molecule atomic force microscope experiments. These simulations suggest a detailed multiple-pathway rupture mechanism involving five major unbinding steps. Binding forces and specificity are attributed to a hydrogen bond ne...

In this paper, we develop the theoretical foundations of discrete Dirac mechanics, that is, discrete mechanics of degenerate Lagrangian/Hamiltonian systems with constraints. We first construct discrete analogues of Tulczyjew’s triple and induced Dirac structures by considering the geometry of symplectic maps and their associated generating functions. We demonstrate that this framework provides ...