Proteomics studies based on mass spectrometry (MS) are gaining popular applications in biomedical research for protein identification/quantification and biomarker discovery, especially for potential early diagnosis and prognosis of severe disease before the occurrence of symptoms. However, MS data collected using current technologies are very noisy and appropriate data preprocessing is critical...

Phosphoproteomics is a powerful analytical platform for identification and quantification of phosphorylated peptides and assignment of phosphorylation sites. Bioinformatics tools to identify phosphorylated peptides from their tandem mass spectra and protein sequence databases are important part of phosphoproteomics. In this work, we discuss general informatics aspects of mass-spectrometry-based...

Axion particles are among the best candidates to explain dark matter and resolve strong $CP$ problem in Standard Model. If such a particle exists, core of stars will produce them large amounts. For first time, we predict axion spectra their associated luminosities for several low-mass stars---one two solar masses main sequence post-main stages evolution. Equally, also compute x-ray excess emiss...

We describe an approach to screen large sets of MALDI-MS mass spectra for protein isoforms separated on two-dimensional electrophoresis gels. Mass spectra are matched against each other by utilizing extracted peak mass lists and hierarchical clustering. The output is presented as dendrograms in which protein isoforms cluster together. Clustering could be applied to mass spectra from different s...

Five new homoleptic [NiX(4)](2-) compounds have been prepared with the fluorinated ligands OC(6)F(5) (OAr(F)), OC(6)H(3)(CF(3))(2) (OAr'), and OC(4)F(9) (OR(F)) and characterized with X-ray crystallography, magnetic susceptibility, and elemental analysis. Electronic spectral studies show that these ligands engender a ligand-field environment similar to that of fluoride and thus act electronical...

In this paper we explore the use of the novel relativistic intermediate Hamiltonian Fock-space coupled-cluster method in the calculation of the electronic spectrum for small actinyl ions (NpO2+, NpO2(2+), and PuO2(2+)). It is established that the method, in combination with uncontracted double-zeta quality basis sets, yields excitation energies in good agreement with experimental values, and be...