flavobacterium

Sediminicola sp. YIK13 is a marine flavobacterium, isolated from tidal flat sediment. Here, we present the first complete genome sequence of this genus, which consists of 3,569,807 bp with 39.4% GC content. This strain contains proteorhodopsin, as well as retinal biosynthesis genes, allowing it to utilize sunlight as an energy source.

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Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282T)

2012

Thomas Riedel Brittany Held Matt Nolan Susan Lucas Alla Lapidus Hope Tice Tijana Glavina Del Rio Jan-Fang Cheng Cliff Han Roxanne Tapia Lynne A. Goodwin Sam Pitluck Konstantinos Liolios Konstantinos Mavromatis Ioanna Pagani Natalia Ivanova Natalia Mikhailova Amrita Pati Amy Chen Krishna Palaniappan Miriam Land Manfred Rohde Brian J. Tindall John C. Detter Markus Göker James Bristow Jonathan A. Eisen Victor Markowitz Philip Hugenholtz Nikos C. Kyrpides Hans-Peter Klenk Tanja Woyke

Gillisia limnaea Van Trappen et al. 2004 is the type species of the genus Gillisia, which is a member of the well characterized family Flavobacteriaceae. The genome of G. limnea R-8282(T) is the first sequenced genome (permanent draft) from a type strain of the genus Gillisia. Here we describe the features of this organism, together with the permanent-draft genome sequence and annotation. The 3...

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