نتایج جستجو برای: biosynthetic gene clusters

تعداد نتایج: 1274616  

2015
Ryan F. Seipke

Streptomyces spp. are robust producers of medicinally-, industrially- and agriculturally-important small molecules. Increased resistance to antibacterial agents and the lack of new antibiotics in the pipeline have led to a renaissance in natural product discovery. This endeavor has benefited from inexpensive high quality DNA sequencing technology, which has generated more than 140 genome sequen...

2018
Dimitris Kallifidas Guangde Jiang Yousong Ding Hendrik Luesch

BACKGROUND Genome sequencing revealed that Streptomyces sp. can dedicate up to ~ 10% of their genomes for the biosynthesis of bioactive secondary metabolites. However, the majority of these biosynthetic gene clusters are only weakly expressed or not at all. Indeed, the biosynthesis of natural products is highly regulated through integrating multiple nutritional and environmental signals perceiv...

Journal: :Mycotoxins 2023

A filamentous fungus Aspergillus nidulans produces a mycotoxin sterigmatocystin (ST), in addition to other secondary metabolites (SMs). SM biosynthetic pathways share common precursor substances. However, how the loss of one affects production SMs remains unclear. In this study, we deleted 8 gene clusters (BGCs) or polyketide synthase wA, respectively, and analyzed ST those deletion strains. au...

2017
E Joel Loveridge Cerith Jones Matthew J Bull Suzy C Moody Małgorzata W Kahl Zainab Khan Louis Neilson Marina Tomeva Sarah E Adams Andrew C Wood Daniel Rodriguez-Martin Ingrid Pinel Julian Parkhill Eshwar Mahenthiralingam John Crosby

Pseudomonas mesoacidophila ATCC 31433 is a Gram-negative bacterium, first isolated from Japanese soil samples, that produces the monobactam isosulfazecin and the β-lactam-potentiating bulgecins. To characterize the biosynthetic potential of P. mesoacidophila ATCC 31433, its complete genome was determined using single-molecule real-time DNA sequence analysis. The 7.8-Mb genome comprised four rep...

2015
Avena C. Ross Lauren E. S. Gulland Pieter C. Dorrestein Bradley S. Moore

Marine pseudoalteromonads represent a very promising source of biologically important natural product molecules. To access and exploit the full chemical capacity of these cosmopolitan Gram-(-) bacteria, we sought to apply universal synthetic biology tools to capture, refactor, and express biosynthetic gene clusters for the production of complex organic compounds in reliable host organisms. Here...

2017
Ivana Crnovčić Christian Rückert Siamak Semsary Manuel Lang Jörn Kalinowski Ullrich Keller

Sequencing the actinomycin (acm) biosynthetic gene cluster of Streptomyces antibioticus IMRU 3720, which produces actinomycin X (Acm X), revealed 20 genes organized into a highly similar framework as in the bi-armed acm C biosynthetic gene cluster of Streptomyces chrysomallus but without an attached additional extra arm of orthologues as in the latter. Curiously, the extra arm of the S. chrysom...

Journal: :Diversity 2021

Lichen secondary metabolites are natural products of high medicinal and industrial value, which produced by the fungal symbiont (mycobiont) lichens in response to environmental changes. It has been shown that cultured mycobiont is capable metabolite production, specifically polyketides, polyketide production affected presence or absence algal cyanobacterial (photobiont). Identification synthase...

2013
Natsuko Ichikawa Machi Sasagawa Mika Yamamoto Hisayuki Komaki Yumi Yoshida Shuji Yamazaki Nobuyuki Fujita

This article introduces DoBISCUIT (Database of BIoSynthesis clusters CUrated and InTegrated, http://www.bio.nite.go.jp/pks/), a literature-based, manually curated database of gene clusters for secondary metabolite biosynthesis. Bacterial secondary metabolites often show pharmacologically important activities and can serve as lead compounds and/or candidates for drug development. Biosynthesis of...

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