Background In recent years, next generation high throughput sequencing technologies have proven to be useful tools for investigations concerning the genomics or transcriptomics also of non-model species. Consequently, ornithologists have adopted these technologies and the respective bioinformatics tools to survey the genomes and transcriptomes of a few avian non-model species. The Common Blackb...

Liver and mammary gland are among the most important organs during lactation in dairy cows. With the purpose of understanding both the different and the complementary roles and the crosstalk of those two organs during lactation, a transcriptome analysis was performed on liver and mammary tissues of 10 primiparous dairy cows in mid-lactation. The analysis was performed using a 4×44K Bovine Agile...

February 20, 2015 Type Package Title Machine Learning-based Differential Network Analysis of Transcriptome Data Version 1.1 Date 2013-11-18 Author Chuang Ma and Xiangfeng Wang Maintainer Chuang Ma Depends R (>= 2.15.1), snowfall (>= 1.84-4), igraph (>= 0.6.6), rsgcc (>= 1.0.6), e1071 (>= 1.6-1), randomForest(>= 4.6-7) Imports pROC (>= 1.5.4), ROCR(>= 1.0-5) Suggests big...

Mixed populations of Saccharomyces cerevisiae yeasts and lactic acid bacteria occur in many dairy, food, and beverage fermentations, but knowledge about their interactions is incomplete. In the present study, interactions between Saccharomyces cerevisiae and Lactobacillus delbrueckii subsp. bulgaricus, two microorganisms that co-occur in kefir fermentations, were studied during anaerobic growth...

Abstract The application of transcriptome analyses in forensic genetics has experienced tremendous growth and development the past decade. earliest studies main applications were body fluid tissue identification, using targeted RNA transcripts a reverse transcription endpoint PCR method. A number markers have been identified for forensically most relevant fluids tissues method successf...