نتایج جستجو برای: genomic linkage

تعداد نتایج: 165247  

In this study, 12 retro transposons-based primers (7 IRAP and 5 REMAP primers) and general and mixed linear models (GLM and MLM) were used to identify molecular markers associated to 22 agro morphological traits in 48 different confectionery sunflower accessions. Studied accessions were divided into three main groups using Neighbor Joining method. Study of population structure as a prerequisite...

Journal: :Stroke 2006
Iftikhar J Kullo Keyue Ding Eric Boerwinkle Stephen T Turner Thomas H Mosley Sharon L R Kardia Mariza de Andrade

BACKGROUND AND PURPOSE Genetic factors that influence interindividual variation in levels of plasma homocysteine, a risk factor for vascular disease, are not fully understood. We performed linkage analyses to identify genomic regions that influence homocysteine levels in blacks and non-Hispanic whites. METHODS Subjects (n=2283) belonged to hypertensive sibships and included 1319 blacks (63+/-...

Journal: :The plant genome 2017
Shiliang Cao Alexander Loladze Yibing Yuan Yongsheng Wu Ao Zhang Jiafa Chen Gordon Huestis Jingsheng Cao Vijay Chaikam Michael Olsen Boddupalli M Prasanna Felix San Vicente Xuecai Zhang

Tar spot complex (TSC) is one of the most destructive foliar diseases of maize ( L.) in tropical and subtropical areas of Central and South America, causing significant grain yield losses when weather conditions are conducive. To dissect the genetic architecture of TSC resistance in maize, association mapping, in conjunction with linkage mapping, was conducted on an association-mapping panel an...

2015
Jared W Westbrook Vikram E Chhatre Le-Shin Wu Srikar Chamala Leandro Gomide Neves Patricio Muñoz Pedro J Martínez-García David B Neale Matias Kirst Keithanne Mockaitis C Dana Nelson Gary F Peter John M Davis Craig S Echt

A consensus genetic map for Pinus taeda (loblolly pine) and Pinus elliottii (slash pine) was constructed by merging three previously published P. taeda maps with a map from a pseudo-backcross between P. elliottii and P. taeda. The consensus map positioned 3856 markers via genotyping of 1251 individuals from four pedigrees. It is the densest linkage map for a conifer to date. Average marker spac...

Journal: :Genetics 2006
Keita Suwabe Hikaru Tsukazaki Hiroyuki Iketani Katsunori Hatakeyama Masatoshi Kondo Miyuki Fujimura Tsukasa Nunome Hiroyuki Fukuoka Masashi Hirai Satoru Matsumoto

An SSR-based linkage map was constructed in Brassica rapa. It includes 113 SSR, 87 RFLP, and 62 RAPD markers. It consists of 10 linkage groups with a total distance of 1005.5 cM and an average distance of 3.7 cM. SSRs are distributed throughout the linkage groups at an average of 8.7 cM. Synteny between B. rapa and a model plant, Arabidopsis thaliana, was analyzed. A number of small genomic seg...

Journal: :Genetics 2008
J Stapley T R Birkhead T Burke J Slate

Passeriformes are the largest order of birds and one of the most widely studied groups in evolutionary biology and ecology. Until recently genomic tools in passerines relied on chicken genomic resources. Here we report the construction and analysis of a whole-genome linkage map for the zebra finch (Taeniopygia guttata) using a 354-bird pedigree. The map contains 876 SNPs dispersed across 45 lin...

2015
Sangkyu Kim David A. Welsh Leann Myers Katie E. Cherry Jennifer Wyckoff S. Michal Jazwinski

We have completed a genome-wide linkage scan for healthy aging using data collected from a family study, followed by fine-mapping by association in a separate population, the first such attempt reported. The family cohort consisted of parents of age 90 or above and their children ranging in age from 50 to 80. As a quantitative measure of healthy aging, we used a frailty index, called FI34, base...

2013
Sachiko N. Isobe Hideki Hirakawa Shusei Sato Fumi Maeda Masami Ishikawa Toshiki Mori Yuko Yamamoto Kenta Shirasawa Mitsuhiro Kimura Masanobu Fukami Fujio Hashizume Tomoko Tsuji Shigemi Sasamoto Midori Kato Keiko Nanri Hisano Tsuruoka Chiharu Minami Chika Takahashi Tsuyuko Wada Akiko Ono Kumiko Kawashima Naomi Nakazaki Yoshie Kishida Mitsuyo Kohara Shinobu Nakayama Manabu Yamada Tsunakazu Fujishiro Akiko Watanabe Satoshi Tabata

The cultivated strawberry (Fragaria × ananassa) is an octoploid (2n = 8x = 56) of the Rosaceae family whose genomic architecture is still controversial. Several recent studies support the AAA'A'BBB'B' model, but its complexity has hindered genetic and genomic analysis of this important crop. To overcome this difficulty and to assist genome-wide analysis of F. × ananassa, we constructed an integ...

Journal: :Hypertension 2002
Richard S Cooper Amy Luke Xiaofeng Zhu Donghui Kan Adebowale Adeyemo Charles Rotimi Nourdine Bouzekri Ryk Ward

An understanding of the genetic influences on hypertension would help unravel the pathophysiology of this complex disorder and improve our understanding of causal mechanisms. Contemporary technology makes it possible to examine enough genetic markers to support a generalized search across the entire genome for candidate regions. In the present study, a family set was recruited from southwest Ni...

Journal: :Genetics 2002
Y M Parsons K L Shaw

As with many organisms of evolutionary interest, the Hawaiian cricket Laupala genome is not well characterized genetically. Mapping such an unexplored genome therefore presents challenges not often faced in model genetic organisms and not well covered in the literature. We discuss the evolutionary merits of Laupala as a model for speciation studies involving prezygotic change, our choice of mar...

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